Query= MSMg01no214_a21.b1 MSMg01no214_a21.b1 CHROMAT_FILE:
MSMg01no214_a21.b1 PHD_FILE: MSMg01no214_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:15 2005
(669 letters)
>mm_chr12_7850834_7851902
Length = 1069
Score = 1181 bits (611), Expect = 0.0
Identities = 644/665 (96%), Gaps = 18/665 (2%)
Strand = Plus / Minus
Query: 5 gaattctttctctctcactctctctgtctctgtctccccccccccctgtgtatccttggc 64
||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 1019 gaattctttctctctcagtctctctgtctctg--tccccccccc---gtgtatccttggc 965
Query: 65 tgctctggaactcattgtgtagaccaagctgtcctcaaactcacagagatctacctgcct 124
||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 964 tgctctggaactcattgtgtagaccaagctgtcctcaaact-------------ctgcct 918
Query: 125 ctgcctctcaagtcctgggattaaaagtgtgcaccaccatgtccagttcaccacttctta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ctgcctctcaagtcctgggattaaaagtgtgcaccaccatgtccagttcaccacttctta 858
Query: 185 taaacagctgtatgtaaggaatgagccatctgttaagaacaatacatcccatgaacacta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 taaacagctgtatgtaaggaatgagccatctgttaagaacaatacatcccatgaacacta 798
Query: 245 ggaattacttgtactttctttatcttaaaagttatttgttagatacaggtatgggaagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ggaattacttgtactttctttatcttaaaagttatttgttagatacaggtatgggaagca 738
Query: 305 tagtgacaattttcgtaagtgttcagatgacagagttgatgccagacaaatggaaagcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tagtgacaattttcgtaagtgttcagatgacagagttgatgccagacaaatggaaagcag 678
Query: 365 aaagcaaatccaaaatgtagagaaaatatcccttggtcaaagacatgttattggtcttca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaagcaaatccaaaatgtagagaaaatatcccttggtcaaagacatgttattggtcttca 618
Query: 425 tcgtgggaaattaaagtttaccttgccacctgatagctgacgccccagggtatggcacct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcgtgggaaattaaagtttaccttgccacctgatagctgacgccccagggtatggcacct 558
Query: 485 ttttggaccttcacgtctgtttctatcaagagcctatttctcagtgagaccatcatgctt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 557 ttttggaccttcacgtctgtttctatcaagagcctatttctcagtgagaccatcatggtt 498
Query: 545 ggtggagtgaagcacaaatggctgaaatactgcaaatctctgcccttgccactatggcca 604
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 497 ggtggagtgaagcacaaatggctgaaacactgcaaatctctgcccttgccactatggcca 438
Query: 605 ttctgttcatcaattatcacaaggttacctgggaaagtacctacactatcattttcagat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttctgttcatcaattatcacaaggttacctgggaaagtacctacactatcattttcagat 378
Query: 665 tgcat 669
|||||
Sbjct: 377 tgcat 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_a21.g1 MSMg01no214_a21.g1 CHROMAT_FILE:
MSMg01no214_a21.g1 PHD_FILE: MSMg01no214_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:15 2005
(647 letters)
>mm_chr12_7835669_7836715
Length = 1047
Score = 1228 bits (635), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Plus
Query: 1 actctctccaaaggccttctatttttatcactttcctttaaatattttgggctttgtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctctccaaaggccttctatttttatcactttcctttaaatattttgggctttgtttg 260
Query: 61 ttgttgtcttgttttgtttcattttcagattccaacatcacttacttctgcacttatact 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttgttttgttttgtttcattttcagattccaacatcacttacttctgcacttatact 320
Query: 121 acttcctaacttccagctttggtttacatcttccccttttgcatttattcttgaagttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcctaacttccagctttggtttacatcttccccttttgcatttattcttgaagttga 380
Query: 181 agcttaaatcattgatctgatgcccaaactacaatataaacattcaatgctatagattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttaaatcattgatctgatgcccaaactacaatataaacattcaatgctatagattac 440
Query: 241 cctttgaaaatcacattagctacccactcaacttttacactttttgtttcaaaggacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctttgaaaatcacattagctacccactcaacttttacactttttgtttcaaaggacaca 500
Query: 301 ttttcaatattccatgtaacttctcagctaacccatgaaatgttcagaaaggcatatgga 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ttttcaatattccatgtaacttctcagctaacctatgaaatgttcagaaaggcatatgga 560
Query: 361 taaatattttaaacactggggattttgtaagtttttcccagtatttgttgctattttagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatattttaaacactggggattttgtaagtttttcccagtatttgttgctattttagt 620
Query: 421 tctatttttaatatttagtttaggtctgtggcaacaaaacacagacacacaatgatgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctatttttaatatttagtttaggtctgtggcaacaaaacacagacacacaatgatgatt 680
Query: 481 gttcatcacagtgggccagaatattcttttggtgaatgcgtctgtgtccttaatgacctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcatcacagtgggccagaatattcttttggtgaatgcgtctgtgtccttaatgacctc 740
Query: 541 tgtggagtgcgttcagtgatgccaagttggttcattgtattgttcctttattttgttttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtggagtgcgttcagtgatgccaagttggttcattgtattgttcctttattttgttttt 800
Query: 601 ataacacaagttctgtttatgtgttttatctaccgatgttggagtac 647
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 801 ataacacaagttctgtttatgtgttttatctactgatgttggagtac 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
