Query= MSMg01no215_f10.b1 MSMg01no215_f10.b1 CHROMAT_FILE:
MSMg01no215_f10.b1 PHD_FILE: MSMg01no215_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:58 2005
(305 letters)
>mm_chr12_28842857_28843560
Length = 704
Score = 567 bits (293), Expect = e-166
Identities = 303/307 (98%), Gaps = 3/307 (0%)
Strand = Plus / Minus
Query: 1 taagaagtgacttttattctatcatttataaccaatccattggtgacccaaatctcctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 362 taagaagtgacttttattctatcatttataaccaatccattggtgacccaaat-tactat 304
Query: 61 aattacctttgctttagcaatttattgagccacaccatggaagcttatacatcatgctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aattacctttgctttagcaatttattgagccacaccatggaagcttatacatcatgctta 244
Query: 121 tcagatggttaatagtgaatgctcctcaaattccttttctgga--atatatatatatata 178
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 243 tcagatggttaatagtgaatgctcctcaaattccttttctggaatatatatatatatata 184
Query: 179 tatatatacatatatatatatttgtctagaaccacatagctcatatgaaggcctttgtgt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tatatatacatatatatatatttgtctagaaccacatagctcatatgaaggcctttgtgt 124
Query: 239 ctttacatatgaatgttaaattcatgaatgtatacaggggacgtgctttaaaaatatttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctttacatatgaatgttaaattcatgaatgtatacaggggacgtgctttaaaaatatttt 64
Query: 299 ggaaata 305
|||||||
Sbjct: 63 ggaaata 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 704
Length adjustment: 9
Effective length of query: 296
Effective length of database: 695
Effective search space: 205720
Effective search space used: 205720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no215_f10.g1 MSMg01no215_f10.g1 CHROMAT_FILE:
MSMg01no215_f10.g1 PHD_FILE: MSMg01no215_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:58 2005
(289 letters)
>mm_chr12_28776300_28776988
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1 aaatgcttgtttgtctgcagcaaaccccgtgatctccccccttgaaatgctgtttcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgcttgtttgtctgcagcaaaccccgtgatctccccccttgaaatgctgtttcaaaa 260
Query: 61 ttctcaaaactacgatttccttccctggcatgctgagcctgttgtgtgtggtgatgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcaaaactacgatttccttccctggcatgctgagcctgttgtgtgtggtgatgtgat 320
Query: 121 gtatcgtttattaataataaccctagaattgctaagtctgtatcacaatgactcacgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatcgtttattaataataaccctagaattgctaagtctgtatcacaatgactcacgatg 380
Query: 181 ctctcttcacaaaaggtcatctcctccccaggctgccaaacacactgttctcataaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctcttcacaaaaggtcatctcctccccaggctgccaaacacactgttctcataaagta 440
Query: 241 aaatatgcttctttccacacaatatcatctttctcaaatatctatatat 289
|||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatatgcagctttccacacaatatcatctttctcaaatatctatatat 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
