Query= MSMg01no215_o19.b1 MSMg01no215_o19.b1 CHROMAT_FILE:
MSMg01no215_o19.b1 PHD_FILE: MSMg01no215_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:43 2005
(286 letters)
>mm_chr12_84789363_84790048
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 280/292 (95%), Gaps = 10/292 (3%)
Strand = Plus / Plus
Query: 1 acaggccagctcgttctgcacctctgttggccagaccaagcaccagctagaacaagggag 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 199 acaggccagctcgttctgcacctccgttggccagaccaagcaccagctagaacaagggag 258
Query: 61 ggagagctttgaggacagcctagggacttgatagattctctctctcctctcccctctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggagagctttgaggacagcctagggacttgatagattctctctctcctctcccctctctc 318
Query: 121 tc------tcctctctctcttatctctctctctctctctctctctctctctctctctcct 174
|| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 319 tctctctttcctctctctct----tctctctctctctctctttctctctctctctctcct 374
Query: 175 cttcaaagcaaagagcagacatcaattaatcctcaaaagatgctttcaaggcaagcatca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttcaaagcaaagagcagacatcaattaatcctcaaaagatgctttcaaggcaagcatca 434
Query: 235 ccccttttggagcccagcaagggaagtcgggtagttggagggaggagaggaa 286
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ccccttttggagcccagcaagggaagtcgggtagttggagggaggagaggaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_o19.g1 MSMg01no215_o19.g1 CHROMAT_FILE:
MSMg01no215_o19.g1 PHD_FILE: MSMg01no215_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:43 2005
(199 letters)
>mm_chr12_84944514_84945112
Length = 599
Score = 339 bits (175), Expect = 1e-97
Identities = 184/187 (98%)
Strand = Plus / Minus
Query: 1 acttctggaggtggtaggaaaaccaaatttcctaacctgcaatgcaacgtgtttcttggg 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 346 acttctggaggtggtaggaaaaccaaatttcctaacctgcaaggcaaggtgtttcttggg 287
Query: 61 atctggcaaattcaccaagtcagtgacatttcttagcacagtttgtatatttcacactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 286 atctggcaaattcaccaagtcagtgacatttcttagcacagtttgtatatttcacacagt 227
Query: 121 atagctgaatgcagcctcatgaactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atagctgaatgcagcctcatgaactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 167
Query: 181 tgtgtgt 187
|||||||
Sbjct: 166 tgtgtgt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
