Query= MSMg01no216_h05.b1 MSMg01no216_h05.b1 CHROMAT_FILE:
MSMg01no216_h05.b1 PHD_FILE: MSMg01no216_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:27 2005
(314 letters)
>mm_chr12_84788965_84789677
Length = 713
Score = 543 bits (281), Expect = e-159
Identities = 305/317 (96%), Gaps = 8/317 (2%)
Strand = Plus / Plus
Query: 5 gaattctttgagatggaaatacttatcttgaagcagggtgtcatccttgcctccctgaac 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgagacggaaatacttatcttgaagcagggtgtcatccttgcctccctgaac 264
Query: 65 ctcatgaaattaacatatcaatagcctggcagagggactgctttgagaggtgacagatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcatgaaattaacatatcaatagcctggcagagggactgctttgagaggtgacagatta 324
Query: 125 taactcctcttgcctctgacacttaggaagcttttttaaaaagagagagaagagaacaat 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 taactcctcttgcctctgacacttaggaagcttttt-aaaaagagagagaagagaacaat 383
Query: 185 ttccaaatgagaaaatgtcacagatggccacaaaccaactttccctgggggatgatcgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttccaaatgagaaaatgtcacagatggccacaaaccaactttccctgggggatgatcgtt 443
Query: 245 tggatgataatattctttctccaggttaaaatactaaa-------gcaagatggtgtatc 297
| ||||||||||||||||||||||||||||| || ||| |||||||||||||||
Sbjct: 444 tcgatgataatattctttctccaggttaaaaaacaaaaaacaaaagcaagatggtgtatc 503
Query: 298 atgcccacctgagggct 314
|||||||||||||||||
Sbjct: 504 atgcccacctgagggct 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_h05.g1 MSMg01no216_h05.g1 CHROMAT_FILE:
MSMg01no216_h05.g1 PHD_FILE: MSMg01no216_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:27 2005
(190 letters)
>mm_chr12_84944514_84945103
Length = 590
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%)
Strand = Plus / Minus
Query: 1 acttctggaggtggtaggaaaaccaaatttcctaacctgcaaggcaagctgtttcttggg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 346 acttctggaggtggtaggaaaaccaaatttcctaacctgcaaggcaaggtgtttcttggg 287
Query: 61 atctggcaaattcaccaagtcagtgacatttcttagcacagtttgtatatttcacactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 286 atctggcaaattcaccaagtcagtgacatttcttagcacagtttgtatatttcacacagt 227
Query: 121 atagctgaatgcagcctcatgaactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atagctgaatgcagcctcatgaactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 167
Query: 181 tgtgtgt 187
|||||||
Sbjct: 166 tgtgtgt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
