Query= MSMg01no217_e14.b1 MSMg01no217_e14.b1 CHROMAT_FILE:
MSMg01no217_e14.b1 PHD_FILE: MSMg01no217_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:44 2005
(370 letters)
>mm_chr12_98113247_98114011
Length = 765
Score = 580 bits (300), Expect = e-170
Identities = 340/356 (95%), Gaps = 6/356 (1%)
Strand = Plus / Plus
Query: 15 gaattcttttacatatatcagtcttttatctaagagttgtcctgaataccagtaattact 74
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 215 gaattcttttacatatatcagtctt-----taagagttgtcctgaataccagtaattact 269
Query: 75 tcagcatatgagtggtcagctcacagtccactgaattaataatgtgcattctgtttatct 134
|||||||||| ||||||| || | |||||||||||||||||||||||||||||| |||||
Sbjct: 270 tcagcatatgcgtggtcaactaatagtccactgaattaataatgtgcattctgtctatct 329
Query: 135 tttcttctgtcactggatacttgtgtctctatataccctattatgagtattgtaactagc 194
|||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||
Sbjct: 330 tttcttctgtcactggatacttatgtctctatataccctattattaatattgtaactagc 389
Query: 195 aatttccatactgatatttata-aaatattttaaatctctgtgagcagagaggacaaata 253
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 390 aatttccatactgatatttatacaaatattttaaatctctgcgagcagagaggacaaata 449
Query: 254 ctaaatcacagaggaaagacatatttaatctttcaaagaacttccaaagtttcctaaatt 313
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctgaatcacagaggaaagacatatttaatctttcaaagaacttccaaagtttcctaaatt 509
Query: 314 gctaagcaacacttggcaggtgtgtcagaatatcaacagactacctatggctagca 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gctaagcaacacttggcaggtgtgtcagaatatcaacagactacctatggctagca 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 765
Length adjustment: 9
Effective length of query: 361
Effective length of database: 756
Effective search space: 272916
Effective search space used: 272916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_e14.g1 MSMg01no217_e14.g1 CHROMAT_FILE:
MSMg01no217_e14.g1 PHD_FILE: MSMg01no217_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:44 2005
(189 letters)
>mm_chr12_98238174_98238767
Length = 594
Score = 337 bits (174), Expect = 3e-97
Identities = 187/194 (96%), Gaps = 5/194 (2%)
Strand = Plus / Minus
Query: 1 tttttccttttgtcttatccatgaaaagagttcaaaagtccctaagccagctatgatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttttccttttgtcttatccatgaaaagagttcaaaagtccctaagccagctatgatcta 335
Query: 61 tgaaaaagttaaggttagatgttcaaatgttcatcttcctc-----aaaaaaaaaaaaag 115
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 334 tgaaaaagttaagggtagatgttcaaatgttcatcttcctcaaaaaaaaaaaaaaaaaag 275
Query: 116 acatatcccatttgtactttgctttaaagacccacgttatacaactatttcctgggaaga 175
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 274 acatatcccatttgtactttgctttaaagacccatgttatacaactatttcctgggaaga 215
Query: 176 tttctaaagttgat 189
||||||||||||||
Sbjct: 214 tttctaaagttgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 594
Length adjustment: 8
Effective length of query: 181
Effective length of database: 586
Effective search space: 106066
Effective search space used: 106066
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
