Query= MSMg01no232_i05.b1 MSMg01no232_i05.b1 CHROMAT_FILE:
MSMg01no232_i05.b1 PHD_FILE: MSMg01no232_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:01 2005
(685 letters)
>mm_chr12_98948792_98949878
Length = 1087
Score = 1100 bits (569), Expect = 0.0
Identities = 606/619 (97%), Gaps = 2/619 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctttcttctatttctaaataaatctgaaatatgtatgaagcaaatatttaaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggaattcctttcttctatttctaaataaatctgaaatatgtatgaagcaaatatttaaat 560
Query: 64 aataattatatatgccatagtttaactgaaag--tttttttatagtgcctcagagaattt 121
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 559 aataattatatatgccatagtttaactgaaagtttttttttatagtgcctcagagaattt 500
Query: 122 gctttttaactcttagactctgagataaatgcttcactattgcttattgctacttttagt 181
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctttttaactcatagactctgagataaatgcttcactattgcttattgctacttttagt 440
Query: 182 tcaaatgattcaaacataatttagtttttcatgttcaatttttttcccttagcaattaac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcaaatgattcaaacataatttagtttttcatgttcaatttttttcccttagcaattaac 380
Query: 242 tcctacagtttgaatgttagaaagtgacatttaaacggcttaagaatgcaacttgtttga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcctacagtttgaatgttagaaagtgacatttaaacggcttaagaatgcaacttgtttga 320
Query: 302 ccaccacagcaacaggaaggttcttttgaaaggtagatattatacagggcatagtggcac 361
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccaccacagcaacacgaaagttcttttgaaaggtagatattatacagggcatagtggcac 260
Query: 362 acacttgtaatcccagcatggagaagggtagagccaggagtattaggcattcaactgagt 421
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acacttgtaatcccaacatgcagaagggtagagccaggagtattaggcattcaactgagt 200
Query: 422 ttgaactatctaattgggctgcgttagaccctgtctcaaaaataaacaatgatgccttaa 481
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttgaactatctaattaggctgcgttagaccctgtctcaaaaataaacaatgatgccttaa 140
Query: 482 cgagaaaagatgatacccaagggcatcactgaaaatctattgctaggatgagcttctacc 541
|||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||
Sbjct: 139 cgagaaaagatgatacccaagggcatcactgaaaatctgttgctaggaagagattctacc 80
Query: 542 ctgttgtcatttcagcaaaggaagcgtcctgtttgctgggtatatccccattagacccca 601
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 79 ctgttgtcatttcagcaaaggaagtgtcctgtttgttgggtatatccccattagacccca 20
Query: 602 gcatcttcttctatctagc 620
|||||||||||||||||||
Sbjct: 19 gcatcttcttctatctagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1087
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1077
Effective search space: 726975
Effective search space used: 726975
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_i05.g1 MSMg01no232_i05.g1 CHROMAT_FILE:
MSMg01no232_i05.g1 PHD_FILE: MSMg01no232_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:01 2005
(658 letters)
>mm_chr12_98786404_98787461
Length = 1058
Score = 1228 bits (635), Expect = 0.0
Identities = 653/659 (99%), Gaps = 2/659 (0%)
Strand = Plus / Plus
Query: 1 agaaggaccaattaaagtggctgtattaaaagggggctgtgagaaaaacaatctgtaggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 agaaggaccaattaaagtggctgtattaaaaggggggtgtgagaaaaacaatctgtaggg 260
Query: 61 tagatggggcacaacaggggtgagagcaagataagaaaggtaaaatcgagagtaatcagg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tagatggggcacaacaggggtgagagcaagataagaaaggtaaaattgagagtaatcagg 320
Query: 121 ttgcatcatgtacatgtatgaagctggaaaagaacaaatggaatcagcttttacaaa-ca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ttgcatcatgtacatgtatgaagctggaaaagaacaaatggaatcagcttttacaaagc- 379
Query: 180 cccaaacagaaaacaaatgagtccagagatatgccacagttgttaaaagcacttgatgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccaaacagaaaacaaatgagtccagagatatgccacagttgttaaaagcacttgatgct 439
Query: 240 ctagacgaggaactaggttcacttcccatcacctacaccaggagactcataaccactgac 299
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 440 ctagacgaggaactaggttcacttcccatcacccacaccaggagactcacaaccactgac 499
Query: 300 atcctcttctggcctctgagggaactagcacacaacatgggcacacatacccccatacaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atcctcttctggcctctgagggaactagcacacaacatgggcacacatacccccatacaa 559
Query: 360 ataaaataaaaactgccaaaaccgtaccaagaaattggaatgcaaatggtcaaataaatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ataaaataaaaactgccaaaaccgtaccaagaaattggaatgcaaatggtcaaataaatc 619
Query: 420 tataaaaacatcagaaacaaaaagaatggcagtggatacatggaaactaaaatttaaaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tataaaaacatcagaaacaaaaagaatggcagtggatacatggaaactaaaatttaaaac 679
Query: 480 tgccatataatttaagttccttttccagtgacctgggccaattttttttctccatcgttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgccatataatttaagttccttttccagtgacctgggccaattttttttctccatcgttt 739
Query: 540 caaatgcagaataaaaattctctcaagaaatatgctatgaaattgacatagctccaattc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaatgcagaataaaaattctctcaagaaatatgctatgaaattgacatagctccaattc 799
Query: 600 agaacagctattctcaataggacatggattttctaaggcgagctccccatggaaattac 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agaacagctattctcaataggacatggattttctaaggcgagctccccatggaaattac 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
