Query= MSMg01no232_l16.b1 MSMg01no232_l16.b1 CHROMAT_FILE:
MSMg01no232_l16.b1 PHD_FILE: MSMg01no232_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:17 2005
(665 letters)
>mm_chr12_90549211_90550273
Length = 1063
Score = 1210 bits (626), Expect = 0.0
Identities = 653/662 (98%), Gaps = 2/662 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgctagagaataaggggagcctggaggctgaggaccttttctagacaggtttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ggaattctgctagagaataaggggagcctggaggctgaggaccttttctagacaggtttc 804
Query: 64 cctcaattagccatcaatccagctgtatggtggtataggaagagagtccacatgaaagat 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cctcaattagccaacaatccagctgtatggtggtataggaagagagtccacatgaaagat 744
Query: 124 gaatgcagtcagtaagactaagttcaataatcctgtccaggataattgatataaaatgtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaatgcagtcagtaagactaagttcaataatcctgtccaggataattgatataaaatgtc 684
Query: 184 aagctggggtttcagactttcacagacctatctgactgcatgcatgttattttgtagata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aagctggggtttcagactttcacagacctatctgactgcatgcatgttattttgtagata 624
Query: 244 tactgtgtgaaagactcaccagttagatttagctgatcttccattgcctgcactgaggtt 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tactgtgtgaaagactcatcagttagatttagctgatcttccattgcctgcactgaggtt 564
Query: 304 tgtggcataggatctctctatctgcttttaacatgccaaagaaatcaaggcaagggcttt 363
|||||||||||||| | | |||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 563 tgtggcataggatcac-caatctgcttttaagatgtcaaagaaatcaaggcaagggcttt 505
Query: 364 cagagttggacgaggttctctataacatataactaaggttaattttctatttaattctgg 423
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagagttggaggaggttctctataacatataactaaggttaattttctatttaattctgg 445
Query: 424 aggtttgaatttgaatccggcaccagatcccattctcagtcataagcctcaaaatgaaac 483
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 aggtttgaatttgaatccggcaccagatccca-tctcagtcataagcctcaaaatgaaac 386
Query: 484 agactgatactatggcagcaataaagagatgtaagatatttcaaaagcttgaactctatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agactgatactatggcagcaataaagagatgtaagatatttcaaaagcttgaactctatt 326
Query: 544 acaacagcactctaaaacaattaagatattttgcagcctaattgttaggtagactataca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaacagcactctaaaacaattaagatattttgcagcctaattgttaggtagactataca 266
Query: 604 tatttcccattctatcaatgttgtattaaatagaagtttctggtaataaattaatatgta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatttcccattctatcaatgttgtattaaatagaagtttctggtaataaattaatatgta 206
Query: 664 gg 665
||
Sbjct: 205 gg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1063
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1053
Effective search space: 689715
Effective search space used: 689715
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_l16.g1 MSMg01no232_l16.g1 CHROMAT_FILE:
MSMg01no232_l16.g1 PHD_FILE: MSMg01no232_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:17 2005
(219 letters)
>mm_chr12_90465948_90466566
Length = 619
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%)
Strand = Plus / Plus
Query: 1 gcagctgtccaaatcattctggaattttctgaattataattccatttttggccttgcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagctgtccaaatcattctggaattttctgaattataattccatttttggccttgcaac 260
Query: 61 ttcagaagtttaattctctctccttttctagatgatagtgattaagcaccactgtgatta 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaggagtttaattctctctccttttctagatgatagtgattaagcaccactgtgatta 320
Query: 121 agtgattgagctacacaaagtcctaagtgctaatttgtatgaacttacgtaatctttagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgattgagctacacaaagtcctaagtgctaatttgtatgaacttacgtaatctttagg 380
Query: 181 caaattcagagcaacaggtaggacactggcagtagga 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaattcagagcaacaggtaggacactggcagtagga 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
