CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTAATCTTTCCAAGACTTTTATCATGAAGGGGTGTTGGATTTTGG
CAAATGCTTTCTCAGCATCTTATGACATGTTCATGGTTCTTTTTCCTTTG
AGTTTGTTTGTATCGTGAATTATATTGATGGACTTCCAAATATTGAACCA
TTCCTGCATCCTGGGATAAGCCTACTTGATCATGATGGATTCTTAGAGTC
GGTTTTTGAGAATTTTATTGAGTATTTTTACATCGATATTCATAAAGGAA
ATTGGTCTGAACTTCTCTTTCTTTGTTGGGTCTTTGTGTGATTTCTGTAT
CAGAGTAATTCTGTTTTCATAGAACCCCCCACCCCCACTGTTCCTTCTGT
TTCTATTTTGTGGAATAGTTTGAAGAGTATTAGTATTAAGTCTTCTTTGA
AGGTCTTTAAAATTCTGCACCAAACCCATCTAGTCCTGTGCTCTTTTTGG
TTAGGAGATTATTAATGACTACTTCTATTTCTGAAGGGGTTATGGGACGG
TTTAGATCATTTATCTGATCCTGATTTAACTTTGCTTCCTGGTATCTGTC
TAGAAAAATGTCCATTTCCTTCCTATTTTCCAGTTTTGTTGAGTATAGCC
CTTTTGTATTACGATCTGATGATTTCCTTTGTATTTCTACACTCTCTGCT
TGTTTGCTTCTCTTATTCCTTCCTCCATTTTTCTTCATTTCCTTATTGT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTAAGAGCATCAGAGATCTTTCCGTC
TTCTGAGATTGGACTCTGTTTTTAAAAGAGAGATAAATGGATAAAAACAG
AGACAGAGAAATAAAACATTTAATTGAGGGTGGATCTGGAAGAGTTAGGA
AATGCTGATGAATATGATCAAAATATATTGTATAAAATTCTCAAAAATAC
ATTATTTAAAAATAAAATCACAGCATGGTTGTGCTTGCTTGTATTAGGGT
CACACAGAGAGAAGAGCCTTTAGTATAGCCAGCTTAGCTTAGTTAGAGAA
ACACAAGAACTAGCAAGAGTTTATGTCTCACAAACAGTGAATCTGGCTAC
TGTGAATATGGCTCATAAGAGTTAAAGTGGTAACTTCTCATCTCCACAGC
CATGAGAACATCCAGGATCACATGTGACTACACATTAATTAATGTACTAA
CTAATCAGTGAATACAACTAAAAGTGCACAAGAGATTGAATAGAAATATA
ACTAAAGAGTAATACAAAGTACAGAATCTCATCATTTCCTTCAGTCTTTG
AATCTTCTAGACTGTGGTTTCTTTTTCCAAACCTCACTCTTCTCATAGAG
AAGAAAAGGAACAAATCAAGTAGAAGCTCTCCCTCTAACCCACTCTTCCA
TGTTCTTTCTCTTTCTTTCAGGGCCTTACAAGTGTATTCTCTGGACAA

Query= MSMg01no233_l07.g1 MSMg01no233_l07.g1 CHROMAT_FILE:
MSMg01no233_l07.g1 PHD_FILE: MSMg01no233_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:28 2005
         (672 letters)



>mm_chr12_46668285_46669356
          Length = 1072

 Score = 1259 bits (651), Expect = 0.0
 Identities = 666/671 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaagagcatcagagatctttccgtcttctgagattggactctgtttttaaaagagagat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1044 ctaagagcatcagagatctttccgtcttctgagattggactctgttttttaaagagagat 985

                                                                        
Query: 61   aaatggataaaaacagagacagagaaataaaacatttaattgagggtggatctggaagag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984  aaatggataaaaacagagacagagaaataaaacatttaattgagggtggatctggaagag 925

                                                                        
Query: 121  ttaggaaatgctgatgaatatgatcaaaatatattgtataaaattctcaaaaatacatta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924  ttaggaaatgctgatgaatatgatcaaaatatattgtataaaattctcaaaaatacatta 865

                                                                        
Query: 181  tttaaaaataaaatcacagcatggttgtgcttgcttgtattagggtcacacagagagaag 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864  tttaaaaataaaatcacagcatggttgtgcttgcttgtattagggtcacacagagagaag 805

                                                                        
Query: 241  agcctttagtatagccagcttagcttagttagagaaacacaagaactagcaagagtttat 300
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 804  agcctttagtatagccagcttagcttagttagaggaacacaagaactagcaagagtttat 745

                                                                        
Query: 301  gtctcacaaacagtgaatctggctactgtgaatatggctcataagagttaaagtggtaac 360
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744  gtctcaaaaacagtgaatctggctactgtgaatatggctcataagagttaaagtggtaac 685

                                                                        
Query: 361  ttctcatctccacagccatgagaacatccaggatcacatgtgactacacattaattaatg 420
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684  ttctcatctccacacccatgagaacatccaggatcacatgtgactacacattaattaatg 625

                                                                        
Query: 421  tactaactaatcagtgaatacaactaaaagtgcacaagagattgaatagaaatataacta 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624  tactaactaatcagtgaatacaactaaaagtgcacaagagattgaatagaaatataacta 565

                                                                        
Query: 481  aagagtaatacaaagtacagaatctcatcatttccttcagtctttgaatcttctagactg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564  aagagtaatacaaagtacagaatctcatcatttccttcagtctttgaatcttctagactg 505

                                                                        
Query: 541  tggtttctttttccaaacctcactcttctcatagagaagaaaaggaacaaatcaagtaga 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504  tggtttctttttccaaacctcactcttctcatagagaagaaaaggaacaaatcaagtaga 445

                                                                        
Query: 601  agctctccctctaacccactcttccatgttctttctctttctttcagggccttacaagtg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444  agctctccctctaacccactcttccatgttctttctctttctttcagggtcttacaagtg 385

                       
Query: 661  tattctctgga 671
            |||||||||||
Sbjct: 384  tattctctgga 374


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)