Query= MSMg01no235_h09.b1 MSMg01no235_h09.b1 CHROMAT_FILE:
MSMg01no235_h09.b1 PHD_FILE: MSMg01no235_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:48 2005
(664 letters)
>mm_chr12_31229555_31230617
Length = 1063
Score = 1237 bits (640), Expect = 0.0
Identities = 655/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatattttatccaaatgtttagttatttgccattcccagtgactttaatatttt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatattttatcaaaatgtttagttatttgccattcccagtgactttaatatttt 264
Query: 65 atcagcatgtataaccatttttatctctaaagtcactctcatctgtctctatcttttaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcagcatgtataaccatttttatctctaaagtcactctcatctgtctctatcttttaac 324
Query: 125 ttgtatcattagatagctctatgttctgtcagtttcctgtcagcatctgactggttcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtatcattagatagctctatgttctgtcagtttcctgtcagcatctgactggttcttc 384
Query: 185 tgctcccttctgctcccccccccccccgcgccaccatgtgctttgccctttcttgcatat 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 tgctcccttctgctcccccccccccc-gcgccaccatgtgctttgccctttcttgcatat 443
Query: 245 ctttcttgcatatccttctgatgtagactattgtaacaagcagacagtggctttccttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttcttgcatatccttctgatgtagactattgtaacaagcagacagtggctttccttat 503
Query: 305 ggcttcgatttgcttttcctcattggtaatagtatgaacatcatgtgcatatttgccacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggcttcgatttgcttttcctcattggtaatagtatgaacatcatgtgcatatttgccacc 563
Query: 365 cttatcccgctgtgaggcaatctcacagtatttgctctttctcccattactttgttattc 424
||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttattctgttgtgaggcaatctcacagtatttgctctttctcccattactttgttattc 623
Query: 425 ttgttgcactctgagagctcacaatacattttatacagaagccctgattcaaaagtggca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgttgcactctgagagctcacaatacattttatacagaagccctgattcaaaagtggca 683
Query: 485 cacgtgagcacttccccagtctgtatctcttcttttcattcttttcatgaattttgtatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cacgtgagcacttccccagtctgtatctcttcttttcattcttttcatgaattttgtatt 743
Query: 545 aattcttttaatgaattcatgtattttgtacagcaaatatttctcattttgatgaagtat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aattcttttaatgaattcatgtattttgtacagcaaatatttctcattttgatgaagtat 803
Query: 605 aagctgtagaacttggctttggtatctagtcttagaaatgttcacctaacactggctact 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aagctgtagaacttggctttggtatctagtcttagaaatgttcacctaacactggctact 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space: 688662
Effective search space used: 688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_h09.g1 MSMg01no235_h09.g1 CHROMAT_FILE:
MSMg01no235_h09.g1 PHD_FILE: MSMg01no235_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:48 2005
(638 letters)
>mm_chr12_31386096_31387133
Length = 1038
Score = 1226 bits (634), Expect = 0.0
Identities = 637/638 (99%)
Strand = Plus / Minus
Query: 1 agagaccagacaaagtaaataattgagaggaaattttattgtaaagtgaatgtacatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agagaccagacaaagtaaataattgagaggaaattttattgtaaagtgaatgtacatatc 634
Query: 61 caaaaaggagtatgggcatctctgtggaaagatgttcagagcaggtttttcaatagtatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 caaaaaggagtatgggcatctctgtggaaagatgttcagagcaggtttttcaatagtatc 574
Query: 121 tcatgggaaaagtttagtgaaaagcagcctgattcgtgagctaaggtggaggacctacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcatgggaaaagtttagtgaaaagcagcctgattcgtgagctaaggtggaggacctacaa 514
Query: 181 acagttcaagattttctggaaattaaattgactcctcttttctctctttgcgtggtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acagttcaagattttctggaaattaaattgactcctcttttctctctttgcgtggtattt 454
Query: 241 tcgggtatgtcacggtgtcagatacatgatggagtaaccagtattcccatactgatgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcgggtatgtcacggtgtcagatacatgatggagtaaccagtattcccatactgatgatt 394
Query: 301 tgcagatgtgcctgtagtgaagcaaaggacagttaaagctcatctcagtcagccatgtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgcagatgtgcctgtagtgaagcaaaggacagttaaagctcatctcagtcagccatgtgg 334
Query: 361 gtcgcagctgatttaaaggggtctcgtgcacacaatgtcttgatgtcacatggctctgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtcgcagctgatttaaaggggtctcgtgcacacaatgtcttgatgtcacatggctctgtg 274
Query: 421 gttgctacaaccttgagcccacatgtagtttgtcccagtgtcctctctgcctgcccagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gttgctacaaccttgagcccacatgtagtttgtcccagtgtcctctctgcctgcccagcc 214
Query: 481 cacttcactcttctttccatcttgctccttgtattaccatctgttcttgtatgttgctca 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caattcactcttctttccatcttgctccttgtattaccatctgttcttgtatgttgctca 154
Query: 541 cccttccattagatcccttagtatataaattatgattgttttaaattccccacctagtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cccttccattagatcccttagtatataaattatgattgttttaaattccccacctagtaa 94
Query: 601 ttcttaatctttgtcaaatgatagtatttatatacact 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ttcttaatctttgtcaaatgatagtatttatatacact 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
