Query= MSMg01no235_i05.b1 MSMg01no235_i05.b1 CHROMAT_FILE:
MSMg01no235_i05.b1 PHD_FILE: MSMg01no235_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:52 2005
(329 letters)
>mm_chr12_31956425_31957153
Length = 729
Score = 592 bits (306), Expect = e-173
Identities = 321/326 (98%)
Strand = Plus / Plus
Query: 4 ggaattccagtggcttttttagtgtgttcaagtgggtctctgaccctcagggcaccatgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagtggcttttttagtgtgttcaagtgggtctctgaccctcagggcaccatgc 263
Query: 64 accgtacagctttgtttgtgcaggcttttcccctggaaggggagaagtttgtgtttgttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accgtacagctttgtttgtgcaggcttttcccctggaaggggagaagtttgtgtttgttc 323
Query: 124 agggacaggctgagttatctgatgggttctttgcctcagaggcagaagtgtatagtggaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agggacaggctgagttatctgatgggttctttgcctcagaggcagaagtgtatagtggaa 383
Query: 184 ggttgcttgcttgcaccaaggatgagtttccctgacttggcacgcgtcaccaggtgtgat 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtcgcttgcttgcaccaaggatgagtttccctgacttggcacgcgtcaccaggtgtgat 443
Query: 244 gctcacctgctttctttgctgtcagttggggggcgggggacacgtaattatttgtatttc 303
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 gctcacctgctttctttgctgtcagttggggggcgggggacatgtaattatttgtatttc 503
Query: 304 ttctgtgtctctgttgactgaccccc 329
|||||||||| || |||||||||||
Sbjct: 504 ttctgtgtctttgcagactgaccccc 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_i05.g1 MSMg01no235_i05.g1 CHROMAT_FILE:
MSMg01no235_i05.g1 PHD_FILE: MSMg01no235_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:52 2005
(297 letters)
>mm_chr12_32113950_32114650
Length = 701
Score = 563 bits (291), Expect = e-165
Identities = 297/301 (98%), Gaps = 4/301 (1%)
Strand = Plus / Minus
Query: 1 aattccatcactcttcagatcatactggctgcccctctctctctgcccacacaagttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattccatcactcttcagatcatactggctgcccctctctctctgcccacacaagttgtc 442
Query: 61 ttctcttatttctcttattaatgcttagaagtt----agtttttcttatggtcttcctaa 116
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 ttctcttatttctcttattaatgcttagaagttagacagtttttcttatggtcttcctaa 382
Query: 117 ggaccagcctctaaagaagtcaaagccatcaaataaaataattcctcagcttaatataaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaccagcctctaaagaagtcaaagccatcaaataaaataattcctcagcttaatataaa 322
Query: 177 tgtttgttagccccttttagtattaagataagtctagaagacaacagatgtaactcatat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgttagccccttttagtattaagataagtctagaagacaacagatgtaactcatat 262
Query: 237 tcagaatgtcaaggaaaagagtcaaccagtagccaaccagaaacaaactttctagtgctg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagaatgtcaaggaaaagagtcaaccagtagccaaccagaaacaaactttctagtgctg 202
Query: 297 t 297
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 701
Length adjustment: 9
Effective length of query: 288
Effective length of database: 692
Effective search space: 199296
Effective search space used: 199296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
