TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCTTACAATCCCACTCAGCCTGTTGATAGGTCCACTGGAGTTCAC
ATGAATAAGCTCTAATATCCTCTTTCTATCAGTTTGTTCTCTCCCAAAAA
TTACTGCCTTAGAGATTCAAAGCCCTTTTCTTTGGTCTTGTCACTTCTAA
AACTGTTTCCTGTTGAAAAGGCAACATAAGAGTGAAATTTTCATCTCTGA
GAACTTTTCATTGTCTAAGTACTTCCCTTATGTATATGAAATATTTATGT
TAAGAAACTTCCATTTGCTTCCCTTGGTTAATCTATCTTTTGTAACAAGG
GTCTAATCTATCTAACAACCAATGCTACCTTTGTTAATCCCACAGGAAGG
GAATTTCTGAGACCACTGAGATGATCAACAAGTGAGCAATAAGATGGCAG
TGGAACAACACTGTTGTGAACGTCTATATTGCAAACAAGGAGTGTAGAAT
GTAGTCTCACAGTAGCTGGATGTGACTAGGGTGTTAAGAAGACTACTGTT
ACTAGAAGGAGTATAGCCTCCCGGTTGAAGAGAATGACATTTAAGCAAAA
GCATTGCTGAATTCATTGCGACCCTCAGGGAGTGACTGAAATCAAAATCC
ACGAACAGGAAGAGAAGGAAGCAAAACTGAGCAGAGAAAGATGTTGCTAC
TGTTGTTAGNTCCCAACATGAGATGAACA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATTCAGTCAAAATAATCAAGGCA
TTTTTGAGATGATACTTAGGAGTGCATGAGTTTTGAGTATCTCAAATGGG
ATTTTTCACACCACTCACTACGCTCCTCAATTTTCTTCCTGTTTTAAATA
AAACATTTCCGTGTTTAGTATTGTAGTCTCTAAAGAGAAGCTGACAGCCG
AGGAATCACTGTGCATAAGTCTGTCCACGTGGTTGAGGTTGTGTCTCGAC
CAACTCTAGCATGAAAGGAATGAATGAGGCATTCAACATGCACAGGACAC
TAATTCTAAGTAGTAATTTTGCTTTCTTTTATAATTCACAGACACAAATA
CTGCACATTGACATATTTCTGGAAATCATGACTAGGTATTTACTAAAATA
TGCAATGCATTTATTCTAATGTGTTTGAAGGTATTTCAATCCTCCTAAAC
TCTGATGCTGTGTTTTAAATACCATTTTTCCTACTTTAAGCATTCTTAGG
CCCTTCAGATTTTCTTTAGCTTCATTACTTCCAGCTTAAATAATCATCAC
ATTTAGCTAGNTATATATGTATATATATATTATATATATACATATATATG
TATATTAGATAATTTTAGGAAATCATTGTGTAGTTAATAATTCTTTGAAA
AAATGTTGTTTTGATATCCTGCCTATAAAATCAA

Query= MSMg01no235_k02.g1 MSMg01no235_k02.g1 CHROMAT_FILE:
MSMg01no235_k02.g1 PHD_FILE: MSMg01no235_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:00 2005
         (589 letters)



>mm_chr12_66813725_66814713
          Length = 989

 Score = 1033 bits (534), Expect = 0.0
 Identities = 568/589 (96%), Gaps = 17/589 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattcagtcaaaataatcaaggcatttttgagatgatacttaggagtgcatgagttttga 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 aattcagtcaaaataatcaaggcattttcgagatgatacttaggagtgcatgagttttga 260

                                                                       
Query: 61  gtatctcaaatgggatttttcacaccactcactacgctcctcaattttcttcctgtttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatctcaaatgggatttttcacaccactcactacgctcctcaattttcttcctgtttta 320

                                                                       
Query: 121 aataaaacatttccgtgtttagtattgtagtctctaaagagaagctgacagccgaggaat 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaaacatttccgtgtttagcattgtagtctctaaagagaagctgacagccgaggaat 380

                                                                       
Query: 181 cactgtgcataagtctgtccacgtggttgaggttgtgtctcgaccaactctagcatgaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactgtgcataagtctgtccacgtggttgaggttgtgtctcgaccaactctagcatgaaa 440

                                                                       
Query: 241 ggaatgaatgaggcattcaacatgcacaggacactaattctaagtagtaattttgctttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ggaatgaatgaggcattcaacatgcacaggacactaattctaagtagcaattttgctttc 500

                                                                       
Query: 301 ttttataattcacagacacaaatactgcacattgacatatttctggaaatcatgactagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttataattcacagacacaaatactgcacattgacatatttctggaaatcatgactagg 560

                                                                       
Query: 361 tatttactaaaatatgcaatgcatttattctaatgtgtttgaaggtatttcaatcctcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttactaaaatatgcaatgcatttattctaatgtgtttgaaggtatttcaatcctcct 620

                                                                       
Query: 421 aaactctgatgctgtgttttaaataccatttttcctactttaagcattcttaggcccttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaactctgatgctgtgttttaaataccatttttcctactttaagcattcttaggcccttc 680

                                                                       
Query: 481 agattttctttagcttcattacttccagcttaaataatcatcacatttagctagntatat 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |  
Sbjct: 681 agattttctttagcttcattacttccagcttaaataatcatcacatttagctagtt-t-- 737

                                                            
Query: 541 atgtatatatatattatatatatacatatatatgtatattagataattt 589
              |||||||||||           ||||||||||||||||||||||||
Sbjct: 738 ---tatatatatat-----------atatatatgtatattagataattt 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)