Query= MSMg01no236_c01.b1 MSMg01no236_c01.b1 CHROMAT_FILE:
MSMg01no236_c01.b1 PHD_FILE: MSMg01no236_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:37 2005
(507 letters)
>mm_chr12_41546932_41547838
Length = 907
Score = 942 bits (487), Expect = 0.0
Identities = 502/507 (99%)
Strand = Plus / Minus
Query: 1 agatttcataatggcctctttacctgcagctctattcaggaccattcacctcctctcact 60
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 894 agatttcataatggcctctttacctgcagctctattcaggaccactcagctcctctcact 835
Query: 61 gactctctcactgcagatcaaaacagccgaggctccacaggaacagattttatgtaagct 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gtctctctcactgcagatcaaaacagccgaggctccacaggaacagattttatgtaagct 775
Query: 121 ttatatgaaagggctccatattagcttcattttgccaacaagaaaactaaggctcaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttatatgaaagggctccatattagcttcattttgccaacaagaaaactaaggctcaaaga 715
Query: 181 aagcgacagagctgggttttagaatatccatgtcataactccgacatgatgattgcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aagcgacagagctgggttttagaatatccatgtcataactccgacatgatgattgcacaa 655
Query: 241 gaaaataggctgccttcttggttttgggctgccgtgtgataagcaatgaagatcactgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gaaaataggctgccttcttggttttgggctgccgtgtgataagcaatgaagatcactgat 595
Query: 301 ccaacacaggtaggagagttggcaggctggttgtcactccagaactccaacatgttgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ccaacacaggtaggagagttggcaggctggttgtcactccagaactccaacatgttgctt 535
Query: 361 ttacatgctgccaccataactgctttaaagaagtgttctggttggttgaagcaggacatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttacatgctgccaccataactgctttaaagaagtgttctggttggttgaagcaggacatc 475
Query: 421 aacatttaccttcaatcaataccttacgtaatgcagtcagaactgtgagggaacccagga 480
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 474 aacatttaccttcaatcaataccttgggtaatgcagtcagaactgtgagggaacccagga 415
Query: 481 aagtgaaagagtagaagcgagtcgcag 507
|||||||||||||||||||||||||||
Sbjct: 414 aagtgaaagagtagaagcgagtcgcag 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_c01.g1 MSMg01no236_c01.g1 CHROMAT_FILE:
MSMg01no236_c01.g1 PHD_FILE: MSMg01no236_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:37 2005
(641 letters)
>mm_chr12_41417563_41418602
Length = 1040
Score = 1125 bits (582), Expect = 0.0
Identities = 626/644 (97%), Gaps = 7/644 (1%)
Strand = Plus / Plus
Query: 1 tgggactttcaaacagtgccttctccagcgggaatcattgttttatcccc---actgtgt 57
||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 201 tgggactttcaaacagtgccttccccagcgggaatcattgttttat----gaaactgtgt 256
Query: 58 gtggcacatgtgggtcttctacacactccagctcctggtgatgctgctggtgatgatgtg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 257 gtggcacatgtgggtcttctacacactccagctcctggtgatgctgctggtgatggtgtg 316
Query: 118 ggaattgaaggctaaaggacaatagcgggaaatgaacagcctgtgatgacatgatggggc 177
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 317 ggaattgaaggctaaaggacaatatcgggaaatgaacagcctgtgatgacatgatggggc 376
Query: 178 agtgggggcctggagtcaggaagaagagctgctaggtcagacagattagaacccgtgctg 237
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 agtgggggcctggagtcaggaagaagagcagctaggtcagacagattagaacccgtgctg 436
Query: 238 cctggtgtttgttccctggccacagggttttgaaaggaatctgattgtcctatgaagtat 297
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cctggtgtttgttccctggccgcagggttttgaaaggaatctgattgtcctatgaagtat 496
Query: 298 cctgaagctgctctgagggttgccatccatccactagtccagatggctggcttctttcta 357
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cctgaagctgctctgcgggttgccatccatccactagtccagatggctggcttctttcta 556
Query: 358 acttcagtcctcatgactatggaagggctgatcgtccacctcttctgctccatatgagct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 acttcagtcctcatgactatggaagggctgatcgtccacctcttctgctccatatgagct 616
Query: 418 gggtcgggtgggataaagaagggagagttccagagaagtgcagagcaggtacaaagtctt 477
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gggccgggtgggataaagaagggagagttccagagaagtgcagagcaggtacaaagtctt 676
Query: 478 gaagcctgctagacttaactctcacagcccttctctgaggcacacttcctatgagacaag 537
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 677 gaagcctgctagacttaactctcacagcccttctctgaggcacacatcctatgagacaag 736
Query: 538 cctggggcggggcttcctttctagttctcttcttccttatgacccctgttttaaaacaaa 597
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 737 cctggggcggggcttcctttctagttctcttcttccttatgaacactgttttaaaacaaa 796
Query: 598 caagtcaacaagacacctctcactattctgtattttttcatatt 641
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 797 caagtcaataagacacctctcactattctgtattttttcatatt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1040
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1030
Effective search space: 649930
Effective search space used: 649930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
