CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTACAGTTTTTCTATGAAGGCTGCTAGCAGAATACTGACTTTGAGG
CAGCTAGGACAAGGGTCTTATTCCCCACACCCACAGTGACACACCTACTT
CAACAAGGCCACACCTCCTCCAACAGGGCTACACCTTCTAATACTGCCAC
TACCTGGGTCGAACATACATAAGCTATCACACCTCCTAACCCACATCCAG
TCCACATCATCCCCTACTCTTACTACCTTCTCCCTGTCTAGAGTCTCTCC
AATTCTATCTATTATACCTCTTAGAGTACTGACCAAGATAACACAGTCAC
TTCCTAGATTATAGCAACATTTTCAAAATGGTTATCCTCAACCTGCCTTT
ACTCGAATTCTGATTAAGTTATCCAGAGTACAGCCAGAGTAATTTTTTTA
AAATATAGTTAACACCATACCAACTCCTCAAAGTCACAGCATCTTCTCAG
CTGGCTAAATGTACTGATGTATATCACCATGATACAATGTAATGATCAAA
CAGATAAACAGATAAAATTCTAAACATGGTTAGAATTATGAAAACTTACA
GAAGGTCAAAAGGCATATTAAATAAAGTTTTGAATATGTAGATGGATACT
ACTATTATTATTAACAAGAAAAATCTTTGTGGAAGTCTCTAGACAAAGTC
TTCAATAAATTAAACTAAACAATAAGCAAATCAAGTATCATACATA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTGGAATAACAAAAAACCCAGG
GTAGCAAAAACTATTCTCAACAATACCAAGAACATCTGGTGGAATCACCA
TCCCTGACCTCAAGCTGTATTACAGAGCAATAGTGATAAAAACTGTATGG
TATTGATATAGTTACGGGCAGGTAGATCAATGGAAAAGAATTGAAGACCC
AAAATTGAACCCACACATCTATAGTCACTTGGTCTTTGACAAATGAGCTA
AAACTATCCAGTGGAAAAAAGACAGCATTTTCAGCAAATGGCGCTGGATC
AACTGGAGGTCATATTTGTATAACCACGCCCATTGATCCATTCTTATCTC
CTTGTACAAAGGTCAAGTTCCAGTGGATCCAGGACCTCCACATAAAATCA
GATACACTGAAATTAATAGAAAGGAAAGTGGGGAAGAGCCTCGAGGACAT
GGGTGCAGGGGAAAATTTCCTAAACACAACACCAATGGTTTATGTTCTAT
GGTCAAGCATTAACAAATGGGACCTCATAAAATTGCAAAGATTCTATTAG
GCATAAGATGCTGTCAATAGGACAAAATTGCAACTAACAGATTGGGAAAA
TATCTTTACCAACCCTACATCTGATAGAGAGCTAATATCCAATATATAGA
AAGAACTCAAGAAGTTAGACTCCAGAGAACCAAATAACCCTATTAAAAAA
TG

Query= MSMg01no236_m17.b1 MSMg01no236_m17.b1 CHROMAT_FILE:
MSMg01no236_m17.b1 PHD_FILE: MSMg01no236_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:27 2005
         (701 letters)



>mm_chr12_67093854_67094951
          Length = 1098

 Score = 1263 bits (653), Expect = 0.0
 Identities = 686/699 (98%), Gaps = 7/699 (1%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattctacagtttttc-tatgaaggctgctagcagaatactgactttgaggcagctagg 63
            ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gaattctacag-ttttcatatgaaggctgctagcagaatactgactttgaggcagctagg 1022

                                                                        
Query: 64   acaagggtcttattccccacacccacagtgacacacctacttcaacaaggccacacctcc 123
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 acaagggtcttatttcccacacccacagtgacacacctacttcaacaaggccacacctcc 962

                                                                        
Query: 124  tccaacagggctacaccttctaatactgccactacctgggtcgaacatacataagctatc 183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  tccaacagggctacaccttctaatactgccactacctgggtcgaacatacataagctatc 902

                                                                        
Query: 184  acacctcctaacccacatccagtccacatcatcccctactcttactaccttctccctgtc 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  acacctcctaacccacatccagtccacatcatcccctactcttactaccttctccctgtc 842

                                                                        
Query: 244  tagagtctctccaattctatctattatacctcttagagtactgaccaagataacacagtc 303
            |||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 841  tagagtctctccaat----tctattatacctcttagaatactgaccaagataacacagtc 786

                                                                        
Query: 304  acttcctagattatagcaacattttcaaaatggttatcctcaacctgcctttactcgaat 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 785  acttcctagattatagcaacattttcaaaatggttatcctcaacctgcctttactagaat 726

                                                                        
Query: 364  tctgattaagttatccagagtacagccagagtaatttttttaaaatatagttaacaccat 423
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 725  tctgattaagttatccagagtacagccagagtaatttctttaaaatatagttaacaccat 666

                                                                        
Query: 424  accaactcc-tcaaagtcacagcatcttctcagctggctaaatgtactgatgtatatcac 482
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665  accaactccttcaaagtcacagcatcttctcagctggctaaatgtactgatgtatatcac 606

                                                                        
Query: 483  catgatacaatgtaatgatcaaacagataaacagataaaattctaaacatggttagaatt 542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605  catgatacaatgtaatgatcaaacagataaacagataaaattctaaacatggttagaatt 546

                                                                        
Query: 543  atgaaaacttacagaaggtcaaaaggcatattaaataaagttttgaatatgtagatggat 602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545  atgaaaacttacagaaggtcaaaaggcatattaaataaagttttgaatatgtagatggat 486

                                                                        
Query: 603  actactattattattaacaagaaaaatctttgtggaagtctctagacaaagtcttcaata 662
            |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 485  actactattattatgaacaaggaaaatctttgtggaagtctctagacaaagtcttcaata 426

                                                   
Query: 663  aattaaactaaacaataagcaaatcaagtatcatacata 701
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 425  aattaaactaaacaataagcaaatcaagtatcatacata 387


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1098
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1088
Effective search space:   751808
Effective search space used:   751808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)