Query= MSMg01no237_b21.b1 MSMg01no237_b21.b1 CHROMAT_FILE:
MSMg01no237_b21.b1 PHD_FILE: MSMg01no237_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:51 2005
(506 letters)
>mm_chr12_74871863_74872768
Length = 906
Score = 878 bits (454), Expect = 0.0
Identities = 493/506 (97%)
Strand = Plus / Plus
Query: 1 caaaactagaagcacttgttgggcagacagccttgcagaagtgttttctgtgtaaggccg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 caaaactagaagcacttgttgggcagacagccttgcagaagtgttttctgtgtaaggctg 260
Query: 61 tgtggcctgtgtgcaaagagatgtgcttctagcagagtcttctgtcaaagttcttgtcat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tgtggcctgtgtgcaaagagatgtgcttctagcagagtcttctgtcacagttcttgtcat 320
Query: 121 cagatgaccatgcatgcctcccctccttcacaatctcccagctttgttaaggtttgacac 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagatgtccatgcatgcctcccctccttcacaatctcccagctttgttaaggtttgacac 380
Query: 181 aagtgactccattttgattctgactgtttgcataatcttaaggaatacttgtttttgtat 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgactccattttgattctgactttttgcataatcttaaggaatacttgtttttgtat 440
Query: 241 ttgttgccctggctactattgttgatgctgccattcattctggaagacctgactctggta 300
|||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 441 ttgttgccctggctactactgttgatgctgccgttcatgctggaagacctgactctggta 500
Query: 301 ctcccttgcacggctccatcagacagcctgggaagatgctctgatcttagactctaccag 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcccttgcacagctccatcagacagcctgggaagatgctctgatcttagactctaccag 560
Query: 361 ttcacttagccctaggcttgtttattctttaaaacctcctggcacttgtttccaactctc 420
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 ttcacttagccctagacttgtttattctttaaaaccttctggcacttgtttccaactctc 620
Query: 421 ccttcctctttgttacagcactgtagtttctgaacttgcctgtcatttcatctgtctcag 480
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 ccttcctcttcattacagcactgtagtttctgaacttgcctgtcatttcagctgtctcag 680
Query: 481 cctctgaccgtgctccccactcccat 506
||||||||||||||||||||||||||
Sbjct: 681 cctctgaccgtgctccccactcccat 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_b21.g1 MSMg01no237_b21.g1 CHROMAT_FILE:
MSMg01no237_b21.g1 PHD_FILE: MSMg01no237_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:51 2005
(517 letters)
>mm_chr12_74999524_75000440
Length = 917
Score = 920 bits (476), Expect = 0.0
Identities = 508/524 (96%), Gaps = 10/524 (1%)
Strand = Plus / Minus
Query: 1 tgacatcacagtcagctggtggagtcttaaaagacacaactcgagcccgagcagttgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 728 tgacatcacagtcagctggtggagtcttaaaagacacaactcgagcctgagcagtggtgg 669
Query: 61 tgcatgcctttaatcccagtacttgggaggcagagggaggtggatttctgagtttgaggc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgcacgcctttaatcccagtacttgggaggcagagggaggtggatttctgagtttgaggc 609
Query: 121 cagactgatttacagagtgagttccaggacagccagggctatacagagaaaccctgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cagactgatttacagagtgagttccaggacagccagggctatacagagaaaccctgtctt 549
Query: 181 ggaaaaaaaaaaaaaaaagacacaactcaagaggattctagaaagggaagacgcgagaga 240
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 548 gg---aaaaaaaaaaaaagacacaactcaagaggattctagaaagggaagacgtgagaga 492
Query: 241 aagggacgcaagtctcatctttggaaatcagtggtaacttctctcctgacctagactctt 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 491 aagggacgcaagtctcatctttggaaatcagtggtgacttctctcctgacctagactctt 432
Query: 301 gcaaggtttcaccatacttcttcacccaaggatcaaat-------tgttaaagtcaccca 353
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 431 gcaaggtttcaccatacttcttcacccatggatcaaattttgcactgttaaagtcaccca 372
Query: 354 tctcaaaactaaatgacgtcaccatctctgaggaagcactcgaatgaacagaaggaatgt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tctcaaaactaaatgacgtcaccatctctgaggaagcactcgaatgaacagaaggaatgt 312
Query: 414 gtgtgaatctgacttcccttcctccaggcctctatcacacaccacaccaacatgtaagct 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtgtgaatctgacttcccttcctccaggcctctatcacacaccacaccaacatgtaagct 252
Query: 474 taggtcacagccctctacctttctattaaggatccattctatta 517
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 taggtcacagccctctacctttctattaaggatccattctatta 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
