MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-260L11
Chromosome	12 (Build37)
Map Location	56,864,346 - 56,865,047
singlet/doublet	singlet
Overlap gene	Garnl1
Upstream gene	Snx6, Cfl2, Baz1a, LOC100039804, 2700097O09Rik, LOC665144, EG665137, Srp54, 1700047I17Rik, LOC100039815, LOC665155, LOC100039830, Ppp2r3c, 1110008L16Rik, LOC673593, LOC665366, Psma6, LOC100039871, Nfkbia, Aldoa-ps1, Insm2
Downstream gene	Brms1l, LOC100039915, LOC382600, LOC382601, Mbip, EG621837, E030019B13Rik, Titf1, LOC100039993, Nkx2-9, Pax9, Slc25a21
Link	Open Mouse BAC browser

Click to get alignment info.

name	Snx6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72183 MGI:1919433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cfl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12632 MGI:101763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Baz1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217578 MGI:1309478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 283 ESTs, 2 Proteins

name	LOC100039804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	2700097O09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72658 MGI:1919908
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	EG665137 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665137 MGI:3646392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 53 ESTs, 4 Proteins

name	Srp54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24067 MGI:1346087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700047I17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73385 MGI:1920635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039815 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins

name	LOC665155 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665155
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 509 ESTs, 8 Proteins

name	LOC100039830 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins

name	Ppp2r3c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59032 MGI:1930009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110008L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66132 MGI:1913382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 78 ESTs, 3 Proteins

name	LOC673593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC665366 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 299 ESTs, 6 Proteins pseudo : _no_value

name	Psma6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26443 MGI:1347006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039871 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Nfkbia (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18035 MGI:104741
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aldoa-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79459 MGI:1931052
definition	gene_synonym : 4933425L11Rik; Aldo1-ps1 note : aldolase 1, A isoform, pseudogene 1 pseudo : _no_value

name	Insm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56856 MGI:1930787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Garnl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56784 MGI:1931050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Brms1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52592 MGI:1196337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039915 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs

name	LOC382600 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	LOC382601 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Mbip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217588 MGI:1918320
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621837 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621837 MGI:3649160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 386 ESTs, 2 Proteins

name	E030019B13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104798 MGI:2144804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	Titf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21869 MGI:108067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039993 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Nkx2-9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18094 MGI:1270158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pax9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18511 MGI:97493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217593 MGI:2445059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snx6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387834 GeneID:72183 MGI:1919433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 6 transcript_id : NM_026998.3

name	Cfl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126513132 GeneID:12632 MGI:101763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cofilin 2, muscle transcript_id : NM_007688.2

name	Baz1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263243 GeneID:217578 MGI:1309478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 283 ESTs, 2 Proteins product : bromodomain adjacent to zinc finger domain 1A transcript_id : XM_885873.3

name	2700097O09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312237 GeneID:72658 MGI:1919908
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700097O09 gene transcript_id : NM_028314.1

name	EG665137 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392821 GeneID:665137 MGI:3646392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 53 ESTs, 4 Proteins product : predicted gene, EG665137, transcript variant 2 transcript_id : XM_976235.1

name	Srp54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337278 GeneID:24067 MGI:1346087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal recognition particle 54 transcript_id : NM_011899.3

name	1700047I17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37537561 GeneID:73385 MGI:1920635
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700047I17 gene transcript_id : NM_028527.1

name	LOC100039815 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263247 GeneID:100039815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : similar to putative phosphatase subunit transcript_id : XM_001473587.1

name	LOC665155 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263246 GeneID:665155
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 276 ESTs, 1 Protein product : similar to signal recognition particle 54, transcript variant 3 transcript_id : XM_976391.2

name	LOC100039830 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263249 GeneID:100039830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : similar to putative phosphatase subunit transcript_id : XM_001473627.1

name	Ppp2r3c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109809755 GeneID:59032 MGI:1930009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2, regulatory subunit B'', gamma transcript_id : NM_021529.3

name	1110008L16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392845 GeneID:66132 MGI:1913382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 78 ESTs, 3 Proteins product : RIKEN cDNA 1110008L16 gene transcript_id : XM_885948.2

name	LOC673593 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263251 GeneID:673593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC673593 transcript_id : XM_001473674.1

name	Psma6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364079 GeneID:26443 MGI:1347006
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) subunit, alpha type 6 transcript_id : NM_011968.2

name	Nfkbia (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754839 GeneID:18035 MGI:104741
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha transcript_id : NM_010907.1

name	Insm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9938005 GeneID:56856 MGI:1930787
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulinoma-associated 2 transcript_id : NM_020287.1

name	Garnl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51230691 GeneID:56784 MGI:1931050
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating RANGAP domain-like 1 transcript_id : NM_001003719.1

name	Garnl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51230428 GeneID:56784 MGI:1931050
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating RANGAP domain-like 1 transcript_id : NM_019994.4

name	Brms1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802540 GeneID:52592 MGI:1196337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer metastasis-suppressor 1-like transcript_id : NM_001037756.2

name	LOC100039915 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263254 GeneID:100039915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs product : hypothetical protein LOC100039915 transcript_id : XM_001473780.1

name	Mbip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703881 GeneID:217588 MGI:1918320
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAP3K12 binding inhibitory protein 1 transcript_id : NM_145442.1

name	EG621837 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263256 GeneID:621837 MGI:3649160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 386 ESTs, 2 Proteins product : predicted gene, EG621837 transcript_id : XM_001473882.1

name	E030019B13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392860 GeneID:104798 MGI:2144804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : RIKEN cDNA E030019B13 gene transcript_id : XM_976924.1

name	Titf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254604 GeneID:21869 MGI:108067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid transcription factor 1 transcript_id : NM_009385.2

name	Nkx2-9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154094 GeneID:18094 MGI:1270158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK2 transcription factor related, locus 9 (Drosophila) transcript_id : NM_008701.2

name	Pax9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262162 GeneID:18511 MGI:97493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 9 transcript_id : NM_011041.2

name	Slc25a21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388205 GeneID:217593 MGI:2445059
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 transcript_id : NM_172577.2

name	Snx6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754031 GeneID:72183 MGI:1919433
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : sorting nexin 6 protein_id : NP_081274.2

name	Cfl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671746 GeneID:12632 MGI:101763
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] codon_start : 1 product : cofilin 2, muscle protein_id : NP_031714.1

name	Baz1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263244 GeneID:217578 MGI:1309478
definition	codon_start : 1 product : bromodomain adjacent to zinc finger domain 1A protein_id : XP_890966.3

name	2700097O09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312238 CCDS:CCDS25912.1 GeneID:72658 MGI:1919908
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72658 protein_id : NP_082590.1

name	EG665137 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392822 GeneID:665137 MGI:3646392
definition	codon_start : 1 product : similar to RNA polymerase II subunit hRPB17 isoform 2 protein_id : XP_981329.1

name	Srp54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981338 GeneID:24067 MGI:1346087
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005786 - signal recognition particle (sensu Eukaryota) [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA] codon_start : 1 note : signal recognition particle 54 kDa; 54K subunit of signal recognition particle product : signal recognition particle 54 protein_id : NP_036029.2

name	1700047I17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37537562 CCDS:CCDS25913.1 GeneID:73385 MGI:1920635
definition	GO_function : GO:0003998 - acylphosphatase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC73385 protein_id : NP_082803.1

name	LOC100039815 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263248 GeneID:100039815
definition	codon_start : 1 product : similar to putative phosphatase subunit protein_id : XP_001473637.1

name	LOC665155 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94392826 GeneID:665155
definition	codon_start : 1 product : similar to signal recognition particle 54 isoform 3 protein_id : XP_981485.1

name	LOC100039830 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263250 GeneID:100039830
definition	codon_start : 1 product : similar to putative phosphatase subunit protein_id : XP_001473677.1

name	Ppp2r3c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560309 GeneID:59032 MGI:1930009
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : phosphatase subunit gene g4-1 protein_id : NP_067504.2

name	LOC673593 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263252 GeneID:673593
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473724.1

name	1110008L16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392846 GeneID:66132 MGI:1913382
definition	codon_start : 1 product : hypothetical protein LOC66132 protein_id : XP_891041.2

name	Psma6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755198 CCDS:CCDS25917.1 GeneID:26443 MGI:1347006
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005839 - proteasome core complex (sensu Eukaryota) [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004298 - threonine endopeptidase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : proteasome (prosome, macropain) subunit, alpha type 6 protein_id : NP_036098.1

name	Nfkbia (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754840 CCDS:CCDS25918.1 GeneID:18035 MGI:104741
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045638 - negative regulation of myeloid cell differentiation [Evidence IMP]; GO:0045746 - negative regulation of Notch signaling pathway [Evidence IMP]; GO:0000060 - protein import into nucleus, translocation [Evidence IDA]; GO:0042127 - regulation of cell proliferation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : I(Kappa)B(alpha); nuclear factor of kappa light polyp gene enhancer in B-cell 1 product : nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha protein_id : NP_035037.1

name	Insm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9938006 CCDS:CCDS25919.1 GeneID:56856 MGI:1930787
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS] codon_start : 1 exception : mismatches in translation note : mlt 1 product : insulinoma-associated 2 protein_id : NP_064683.1

name	Garnl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51230692 GeneID:56784 MGI:1931050
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005098 - Ran GTPase activator activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; tulip 1 protein; GAP-related interacting partner to E12; tuberin-like protein 1 product : GTPase activating RANGAP domain-like 1 isoform 3 protein_id : NP_001003719.1

name	Garnl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51230429 GeneID:56784 MGI:1931050
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005098 - Ran GTPase activator activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; tulip 1 protein; GAP-related interacting partner to E12; tuberin-like protein 1 product : GTPase activating RANGAP domain-like 1 isoform 2 protein_id : NP_064378.4

name	Brms1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83649717 GeneID:52592 MGI:1196337
definition	codon_start : 1 product : breast cancer metastasis-suppressor 1-like protein_id : NP_001032845.1

name	LOC100039915 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263255 GeneID:100039915
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473830.1

name	Mbip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703882 CCDS:CCDS25920.1 GeneID:217588 MGI:1918320
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : MAP3K12 binding inhibitory protein 1 protein_id : NP_663417.1

name	EG621837 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263257 GeneID:621837 MGI:3649160
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473932.1

name	E030019B13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392861 GeneID:104798 MGI:2144804
definition	codon_start : 1 product : hypothetical protein LOC104798 protein_id : XP_982018.1

name	Titf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254605 CCDS:CCDS25922.1 GeneID:21869 MGI:108067
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IGI] [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP] [Evidence IGI]; GO:0007492 - endoderm development [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007389 - pattern specification [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : tinman; thyroid-specific enhancer-binding protein product : thyroid transcription factor 1 protein_id : NP_033411.2

name	Nkx2-9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154095 CCDS:CCDS25923.1 GeneID:18094 MGI:1270158
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Drosophila NK2 transcription factor related, locus 9 product : NK2 transcription factor related, locus 9 protein_id : NP_032727.2

name	Pax9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754992 CCDS:CCDS25924.1 GeneID:18511 MGI:97493
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007492 - endoderm development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : paired box gene 9 protein_id : NP_035171.1

name	Slc25a21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369824 CCDS:CCDS25925.1 GeneID:217593 MGI:2445059
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 protein_id : NP_766165.1

name	LOC100039804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039804
definition	number : 4 pseudo : _no_value

name	LOC100039804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039804
definition	number : 3 pseudo : _no_value

name	LOC100039804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039804
definition	number : 2 pseudo : _no_value

name	LOC100039804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039804
definition	number : 1 pseudo : _no_value

name	LOC100039871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039871
definition	number : 1 pseudo : _no_value

name	LOC382600 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382600
definition	number : 1 pseudo : _no_value

name	LOC382600 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382600
definition	number : 2 pseudo : _no_value

name	LOC382601 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382601
definition	number : 1 pseudo : _no_value

name	LOC382601 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382601
definition	number : 2 pseudo : _no_value

name	LOC382601 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382601
definition	number : 3 pseudo : _no_value

name	LOC382601 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382601
definition	number : 4 pseudo : _no_value

name	LOC100039993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039993
definition	number : 5 pseudo : _no_value

name	LOC100039993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039993
definition	number : 4 pseudo : _no_value

name	LOC100039993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039993
definition	number : 3 pseudo : _no_value

name	LOC100039993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039993
definition	number : 2 pseudo : _no_value

name	LOC100039993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039993
definition	number : 1 pseudo : _no_value

name	LOC665144 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263245 GeneID:665144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to Translocase of outer mitochondrial membrane 20 homolog (yeast) pseudo : _no_value transcript_id : XR_031196.1

name	LOC665366 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263253 GeneID:665366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 299 ESTs, 6 Proteins product : similar to Ribosomal protein L18A pseudo : _no_value transcript_id : XR_031339.1

clone name	MSMg01-291H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327N20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-517O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-104M24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-420K07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161O09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-490N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104J17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-333L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-054D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311E16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-260L11.T7 (MSMg01no260_l11.b1)	MSMg01-260L11.TJ (MSMg01no260_l11.g1)
ACC	AG403302	AG403303
length	736	742
length of high quality (start - end)	509 (49 - 557)	638 (80 - 717)
definition	CHROMAT_FILE: MSMg01no260_l11.b1 PHD_FILE: MSMg01no260_l11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:56:54 2005	CHROMAT_FILE: MSMg01no260_l11.g1 PHD_FILE: MSMg01no260_l11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:56:54 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG CGGAATTCTTTGTTTTGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGA TTTTCTGAAGTCCACCTTCTTAAGTTCTTTATATATGTTGAATATTAGTC CCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGT CTTTTTGTCTTATTGATGGTGAGACTTGAATTTTTTATCATACAGATCTT TCACTTCCTTAGTTAGAGTCACGCCAAGATATTTTATATTATTTGTGACT ATATAAGGGTGTTGTTTCCCTAATTTCTTTCTCGGCCTGTTTATTCTTTG TGTAGAGAAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAGCTACT TCACCAAAGCTGTTCACCACCCCCAGGAGTTCTCTGGTGGAATTTTTAGG GTCACTTATATATACTATCATATCATCTGCAAAAAGTGATATTTTTACTT CTTCTTTTCCAATTTGTATCCCCTTAATCTCCTTTTGTTGTCTAATTGCT CTGGTTAGGACTTCCTATACTATGTTGAAGAGGTATGCATATTGTGGCCC GCCTTGTCCAGTCCCTGATTTTAGTGGGACTGCTTTCTGTTTCTCACCAT TTACTTTGTTGTTGTCCACTGTTTTTCTGTATATTGCTTTTCCCTTGCCC ATTTTTGTTCCCTTTACTTCTTTTTTTTCGCATACT	NCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAATACATGTGACATTATG AAAAGACCAAGTCTAAAGGCCACAAACATAGGAGGAATAAAATTTATTTT AAAGACACAGAAAACATTTCAAAAGAATTATAACAGAAAATTCCCTAGAG TTAGGGAAGAGATGCCTATCAATAGAAAGGAGGAATGTGTGGTTCAGAAC ACCAAACAATAAGGCGAGAAAAAACATGCCCTTGAATTTTAACTGAAACA CTAAATATACAGAATGAAGAATGCATACTGATAATGGCAGAGAGAAACAT CAAGTCACACAATAAAGCAGGTCTATCATAACAAAAGCAGATCTGTACTT TGAAACTTTATGCAGTAGAAGACCCCATAAAGATAGATTTCAAGTTCTGG AAGCCAACTGCTAACCCACAAATACAGTCATGGCCATGAGCTGTCCTGTC ACAGGAGGAGGAAAAGTAAAAATCCCATGAATAAAACAGGCTCACAGACT TCATGACCACTAAGTCCATAGGAAATAAGTCATACCAGAATAATAGTTAA CCACAAAAGGGGGGAAAAAAAAACCCTACTAGAATCAACAAAATGACAGA GATCAGTACACAGCATTCAATAAACACTCTGAATAGTTATGGTTTCAATT TCCCAAGAAAAGATATAGACTGGAACACAAGTAGGAACCACT
quality values	Open. Hide. 0 3 6 6 8 8 13 15 13 24 37 59 39 33 32 32 28 28 37 37 37 37 37 41 37 41 48 59 31 31 31 30 23 19 25 14 19 21 11 11 11 12 12 12 12 14 20 20 24 34 59 59 53 53 53 41 44 39 59 59 59 33 25 11 10 10 10 9 9 9 21 24 37 39 46 37 39 41 41 47 53 59 57 57 57 57 50 48 48 50 57 57 57 57 57 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 51 68 68 68 68 68 59 59 44 43 43 46 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 62 62 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 52 52 52 57 57 57 57 57 57 57 59 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 57 59 59 57 57 57 57 68 68 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 57 44 44 28 28 29 44 41 43 43 59 59 68 59 59 59 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 57 57 57 57 57 57 57 57 57 48 46 37 40 28 28 28 41 36 37 39 43 43 43 43 48 57 57 54 68 50 50 44 44 36 36 36 43 43 50 53 57 59 59 57 57 57 48 48 48 59 59 47 59 30 30 17 12 11 9 9 10 12 16 12 14 14 19 34 43 47 50 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 43 43 43 43 43 48 48 57 41 43 30 30 28 30 28 37 37 59 59 59 57 59 54 59 32 24 19 19 23 21 19 12 12 15 19 28 44 37 37 37 35 35 35 42 44 57 57 57 57 43 42 42 42 42 48 57 57 57 59 57 57 47 44 44 46 46 57 47 47 57 57 57 59 57 54 46 46 46 46 48 48 44 57 48 48 42 26 16 9 9 14 14 30 39 40 40 30 28 28 40 40 42 43 19 12 8 8 8 10 12 17 17 17 25 26 14 10 9 9 9 12 13 9 9 9 9 9 10 12 16 12 11 11 8 8 6 6 8 8 8 8 10 8 8 9 12 12 9 9 11 8 8 8 8 10 15 22 23 29 29 24 28 28 28 30 21 13 10 10 10 18 21 16 12 11 11 9 8 8 8 8 8 8 15 9 9 9 9 10 10 10 10 10 19 20 24 17 17 18 15 21 12 14 17 15 12 8 8 8 6 6 8 8 8 8 8 8 8 8 9 10 9 10 13 15 16 10 10 10 10 8 8 8 8 8 8 8 8 8 10 12 10 9 15 10 8 8 8 8 8 13 11 11 11 12 12 10 10 10 9 12 12 10 9 11 8 8 8 8 8 8 11 12 14 16 15 17 11 11 11 11 11 12 11 10 12 12 12	Open. Hide. 0 3 6 6 6 6 8 10 8 8 8 8 8 9 17 26 27 32 41 37 37 47 47 50 50 53 53 50 50 50 50 47 39 25 25 12 9 9 9 9 9 8 8 8 19 23 19 31 23 28 34 32 33 36 36 38 50 53 57 57 57 43 34 28 11 12 18 13 15 8 12 12 26 21 36 40 40 48 48 48 50 50 50 59 54 54 54 50 53 50 68 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 50 57 57 68 68 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 59 59 59 57 57 57 57 57 68 68 68 68 59 59 59 57 57 57 57 57 57 68 68 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 59 59 59 59 57 57 57 68 68 68 68 68 68 57 59 57 57 57 57 57 57 59 52 44 44 43 44 43 43 43 43 47 47 47 57 57 50 50 54 59 59 57 57 57 57 57 57 54 54 54 57 57 54 54 54 59 59 57 57 57 54 54 57 59 59 59 59 59 59 59 59 59 59 54 54 54 48 57 57 57 57 54 57 57 57 57 57 57 57 57 57 48 48 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 48 59 59 59 34 30 30 17 17 14 30 24 30 30 30 34 37 48 48 48 48 57 57 57 57 48 43 43 36 36 39 59 59 47 48 48 59 59 59 59 59 48 48 48 59 59 59 57 57 57 57 54 54 54 54 54 54 57 59 57 57 57 57 48 44 47 44 57 43 59 59 59 59 57 48 48 44 44 43 59 59 59 59 57 48 48 48 48 48 57 57 57 54 54 57 57 50 43 43 43 44 43 44 44 43 43 43 46 46 57 57 68 68 57 57 46 46 39 42 35 42 42 42 42 39 35 37 47 43 48 54 57 57 59 47 43 43 39 43 43 54 54 54 54 54 48 48 44 39 35 35 43 43 34 43 32 39 42 42 39 36 43 42 40 48 48 48 48 48 48 43 43 43 43 43 46 48 48 48 46 46 39 39 36 37 25 24 13 13 13 28 28 30 28 37 32 39 36 37 39 39 39 39 30 30 30 37 37 37 30 30 28 25 23 22 16 16 21 21 24 32 26 35 35 37 39 39 41 41 42 37 29 23 20 19 24 29 37 39 39 39 35 43 43 48 48 48 48 48 48 48 31 34 14 14 14 15 27 24 35 35 37 37 37 37 37 24 22 19 23 25 25 25 30 37 30 25 19 16 13 17 12 14 23 28 34 39 33 20 14 14 14 15 18 22 25 25 33 33 37 22 19 8 8 6 6 8 8 8 8 6 8 6 6 6 7 15 30 28 24 22 22 22 22 22 34 28 24

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no260_l11.g1 MSMg01no260_l11.g1 CHROMAT_FILE:
MSMg01no260_l11.g1 PHD_FILE: MSMg01no260_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:54 2005
         (638 letters)



>mm_chr12_56864211_56865247
          Length = 1037

 Score = 1019 bits (527), Expect = 0.0
 Identities = 628/705 (89%), Gaps = 70/705 (9%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaaatacatgtgacattatgaaaagaccaagtctaaaggccacaaacataggaggaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 caaaatacatgtgacattatgaaaagaccaagtctaaaggccacaaacataggaggaata 195

                                                                       
Query: 61  aaatttattttaaagacacagaaaacatttcaaaagaattataacagaaaattccctaga 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 196 aaatttattttaaagatacagaaaacatttcaaaagaattataacagaaaatttcctaga 255

                                                                       
Query: 121 gttagggaagagatgcctatcaatagaaaggaggaatgtgtggttcagaacaccaaacaa 180
           |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 256 gttagggaagagatgcctatcaatag-aagaaggaatgtgtggttcagaacaccaaacaa 314

                                                                       
Query: 181 taaggcgagaaaaaacatgc-ccttgaattttaactgaaacactaaatatacagaatgaa 239
           |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taaggcgagaaagaacat-ctccttgaattttaactgaaacactaaatatacagaatgaa 373

                                                                       
Query: 240 gaatgcatactgataatggcagagagaaacatcaagtcacacaataaagcaggtctatca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaatgcatactgataatggcagagagaaacatcaagtcacacaataaagcaggtctatca 433

                                                                       
Query: 300 taacaaaagcagatctgtactttgaaactttatgcagtagaagaccccataaagatagat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 taacaaaagcagatctgtactttgaaactttatgcagtagaagaccccataaagatagat 493

                                                                       
Query: 360 ttcaagttctggaagccaactgctaacccacaaatacagtcatggccatgagctgtcctg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttcaagttctggaagccaactgctaacccacaaatacagtcatggccatgagctgtcctg 553

                                                                       
Query: 420 tcacaggaggaggaaaagtaaaaatcccatgaataaaacaggctcacagacttcatgacc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcacaggaggaggaaaagtaaaaatcccatgaataaaacaggctcacagacttcatgacc 613

                                                                       
Query: 480 actaag------------------------------------------------------ 485
           ||||||                                                      
Sbjct: 614 actaagccatctctctatagaagatactttaaaggactatcttaaactaaaaagaaaaaa 673

                                                                       
Query: 486 ------------tccataggaaataagtcataccagaataatagttaaccacaaaagggg 533
                       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttccatccacagtccataggaaataagtcataccagaataatagttaaccacaaaagggg 733

                                                                       
Query: 534 ggaaaaaaaaaccctactagaatcaacaaaatgacagagatcagtacacagcattcaata 593
           | ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 734 gaaaaaaaaaaccctacaagaatcaacaaaatgacagaaatcagtacacagcat-caata 792

                                                        
Query: 594 aacactctgaatagttatggtttcaatttcccaagaaaagatata 638
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aacactctgaatagttatggtttcaatttcccaagaaaagatata 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space:   644956
Effective search space used:   644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information