TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTCATTTATCTCCAATCAATTAAGGTTTGTCCTATGTCTCTCCTT
CATATGTAACTATATAACTATCCAGCCTTCAAACATCAGTGTGAAGAGGA
AATCAATTGAGAGTTAAGAAAATAATCACAGTTTCAGTAACTGAGAAAAA
TAAACTCCATGAATTTTGTCAAGCAAAACTTTTAATAAAGACAAGCACAG
CTTTCCTAAAATACTGCAGAGCTTAGAAATGATGAGACAAAGACAAAATA
ACATAAAATGCTAAGTCTAAAATGACAGGCAAGGAATAACAAGATCTTTT
AAACATGAGCAGAAACATGTTTTAACATAGTTTAAAGTAGTAGACATAAA
TATCCTGGAAATTGACACTGATATTTGGGTTTTTAAATCCTTTTAAGGGT
CCACAGGATGCCACAAAAAACATCAAATTTACATTTTAAGTTTAGAGCAT
AATTAAAACTACTACCAAAACGTAAGAGTTTCTGAAAGTTTTGTGATACA
AAGAGTAGATTATCTCCAAATCAATGAAATACATTGGGTTTTTTGTTTGC
TTTGTTTTGTTTTGTTTTGTTTTGGTTTGTTTTTTCAGAAGAAACATGGT
TTCAGTAGTGCTTTTCAACTACATTTTCATAAATATGTAACTTTAAGTCT
CTATAAAAGAGTTCTATTTTCTGGAATTA

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTCAGGGCTATTTTTACTTCAGAACTAT
TCACTAAGGAGCAGAAGCACAAACAACCCAAGTCTTTACTAAGTGATGAA
GTAATGAATGGTTCTCTACCAGATAATAAAAAAAAACAAGTAAAGGATGA
AATTGTTAGTTGCAGCAGCATGTATGGAAACAGACATCAAATTACCAGGT
TAAACTGAGTACAGGAGGCACGGGAGGACAAGTTCAGTATAGTTTTTCTC
ACATGTGGAAACAAAAATCATTGATGTCATAGACACTGAAAGTAAAATGG
TGATTTTCAGAGACCAGGGAGAGAAAGGGAAAGAGAATTATTGATGAAAT
GGTGAGTATCAGCAGTGTAGGAGGAATAAATTTTGTTGTGCATTTCCACG
TGGTTATTGCTTTAGACAACAGTAACATATCCTTTGTTGAAAAGATAGGA
TTTCCCTGGAAATTTTGCAAACATAAAGAAATGATAAGTTTGGGCAGTGG
TGGCACATGCCTGTAATCCCAGCACGTGGTAGGCAGAGGAAGGTGGCTTT
CTGAGTTCAAGGCCAGCCTAGTCTACAGCATGAGTTCCAGGACAGCCAGG
ACTGCACAGAGAAACCCTGTCTCNAAAAAAAAAAAAAAAAAAAGAAGGAA
AAGAAAGAATAAAAGAATAGAATG

Query= MSMg01no261_j20.b1 MSMg01no261_j20.b1 CHROMAT_FILE:
MSMg01no261_j20.b1 PHD_FILE: MSMg01no261_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:02 2005
         (571 letters)



>mm_chr12_64505332_64506302
          Length = 971

 Score = 1021 bits (528), Expect = 0.0
 Identities = 558/568 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctcatttatctccaatcaattaaggtttgtcctatgtctctccttcatatgta 63
           ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcatttaacactaatcaattaaggtttgtcctatgtctctccttcatatgta 263

                                                                       
Query: 64  actatataactatccagccttcaaacatcagtgtgaagaggaaatcaattgagagttaag 123
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actatataactatccaggcttcaaacatcagtgtgaagaggaaatcaattgagagttaag 323

                                                                       
Query: 124 aaaataatcacagtttcagtaactgagaaaaataaactccatgaattttgtcaagcaaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaataatcacagtttcagtaactgagaaaaataaactccatgaattttgtcaagcaaaa 383

                                                                       
Query: 184 cttttaataaagacaagcacagctttcctaaaatactgcagagcttagaaatgatgagac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttttaataaagacaagcacagctttcctaaaatactgcagagcttagaaatgatgagac 443

                                                                       
Query: 244 aaagacaaaataacataaaatgctaagtctaaaatgacaggcaaggaataacaagatctt 303
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 aaagacaaaataacataaaatgctaagtttaaaatgacaggcaaggaataacaagatctt 503

                                                                       
Query: 304 ttaaacatgagcagaaacatgttttaacatagtttaaagtagtagacataaatatcctgg 363
           ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 504 ttaaacatgagaagaaacatgtattaacattgtttaaagtagtagacataaatatcctgg 563

                                                                       
Query: 364 aaattgacactgatatttgggtttttaaatccttttaagggtccacaggatgccacaaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaattgacactgatatttgggtttttaaatccttttaagggtccacaggatgccacaaaa 623

                                                                       
Query: 424 aacatcaaatttacattttaagtttagagcataattaaaactactaccaaaacgtaagag 483
           ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 624 aacatcaaatttaaattttaagtttagagcataattaatactactaccaaaacgtaagag 683

                                                                       
Query: 484 tttctgaaagttttgtgatacaaagagtagattatctccaaatcaatgaaatacattggg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttctgaaagttttgtgatacaaagagtagattatctccaaatcaatgaaatacattggg 743

                                       
Query: 544 ttttttgtttgctttgttttgttttgtt 571
           ||||||||||||||||||||||||||||
Sbjct: 744 ttttttgtttgctttgttttgttttgtt 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)