Query= MSMg01no262_b01.b1 MSMg01no262_b01.b1 CHROMAT_FILE:
MSMg01no262_b01.b1 PHD_FILE: MSMg01no262_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:36 2005
(524 letters)
>mm_chr12_5166979_5167902
Length = 924
Score = 930 bits (481), Expect = 0.0
Identities = 511/521 (98%), Gaps = 2/521 (0%)
Strand = Plus / Plus
Query: 5 gaattcctatatgtacaccatctttcct-tccaagacatgaattcctcaaaatagagact 63
|||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctatatgtgcaccatcttt-ctctccaagacatgaattcctcaaaatagagact 263
Query: 64 gtcccgtatctccagcatggggacaggctactgttggtgttgagtgaaatggaggacgga 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcccgtatctccaggatggggacaggctactgttggtgttgagtgaaatggaggacgga 323
Query: 124 tctgggccctaactggggagttctccatggtactctgagggtggggccggcagtctagat 183
||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct: 324 tctgggccctaactggggagtcctccatggtgctctgagggtggggccgacagtctagat 383
Query: 184 tcttgtagccaatggctccaccagtgccccagccatgcccctgtgtctctgcctggtgcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcttgtagccaatggctccaccagtgccccagccatgcccctgtgtctctgcctggtgcc 443
Query: 244 atttcagggcaaaagaagttttgagtcctttctttctaatcaagctgtcagtacagagtc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 atttcagggcaaaagaagttttgagtcctttctttctaatcaagctgtcagtacagagcc 503
Query: 304 ccgacagcagacattgatttttctatgagtggagacttttctcatgttcctcatcacgac 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 ccgacagcagacattgatttttctatgagtggagacttttctcatgttcctcatcatgac 563
Query: 364 ggccagttcctccttctagatcttaatctcttctgccactaaaggcctctatttgcttca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggccagttcctccttctagatcttaatctcttctgccactaaaggcctctatttgcttca 623
Query: 424 gttccactgggacctgatctacaatcagcatcagtgttttactctgggtctcagactgga 483
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 624 gttccactgggacctgatctacaatcagcatcagtgttttactctgggtcttagactgga 683
Query: 484 aagaagccacagctaagaccgtgtgagttgaccttgcatct 524
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagaagccacagctaagaccgtgtgagttgaccttgcatct 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_b01.g1 MSMg01no262_b01.g1 CHROMAT_FILE:
MSMg01no262_b01.g1 PHD_FILE: MSMg01no262_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:36 2005
(624 letters)
>mm_chr12_5253679_5254702
Length = 1024
Score = 1122 bits (580), Expect = 0.0
Identities = 613/624 (98%)
Strand = Plus / Minus
Query: 1 cgtgcctgccctctggtgtttataggcactgggaggagaggaggagaggagaggctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 cgtgcctgccctctggtgtttataggcactgggaggagaggaggagaggagaggctggga 765
Query: 61 ggcactgggaggagaggctgtccagaaccagggatttgagatagcacaggccctctgaac 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 764 ggcactgggaggagaggctgtccagaaccagagatttgagatagcacaggccctctgaac 705
Query: 121 tgcctggtattctgacatccaatgagtcctttacctgtatccatctccacgttgttcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tgcctggtattctgacatccaatgagtcctttacctgtatccatctccacgttgttcaga 645
Query: 181 aaacccccaactcaggactcttgccacctggttgccagcccatggcagcacaacaaatct 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaacccccaactcaggacacttgccacctggttgccagcccatggcagcacaacaaatct 585
Query: 241 gtgagcaggtgacccatgtcccccagggagagcagacagggagcagagtatcggaagagt 300
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 584 gtgagcaggcgacccatgtcccccagggagagcagacagggagcagagtatcagaagagt 525
Query: 301 aaatttccaaaccatctacgatcctccggccattctaaagcaaagaacataagtggtaac 360
|||||||||||||||||||||||| |||||||||||||||||||| || |||||| ||||
Sbjct: 524 aaatttccaaaccatctacgatcccccggccattctaaagcaaaggacgtaagtgctaac 465
Query: 361 tcaggcccttgccagagctaatgagaaaaaccagagaacacaggagtctcatttttaaaa 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcaggcccttgccagcgctaatgagaaaaaccagagaacacaggagtctcatttttaaaa 405
Query: 421 tcccaaaattttagtcttatcaccaatgcaacataatacagtaagtacgttaattctaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcccaaaattttagtcttatcaccaatgcaacataatacagtaagtacgttaattctaat 345
Query: 481 ctccctgggctccccccgaatccttttcagctaaggctggcaagaatgagccgcccactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctccctgggctccccccgaatccttttcagctaaggctggcaagaatgagccgcccactt 285
Query: 541 gctgtagacaggagccaagtctgatttggattctgtccctcgcctaggctgcaaataggg 600
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gctgcaggcaggagccaagtctgatttggattctgtccctcgcctaggctgcaaataggg 225
Query: 601 actatctagttcaagtggacatgg 624
||||||||||||||||||||||||
Sbjct: 224 actatctagttcaagtggacatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
