Query= MSMg01no263_g15.b1 MSMg01no263_g15.b1 CHROMAT_FILE:
MSMg01no263_g15.b1 PHD_FILE: MSMg01no263_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:19 2005
(317 letters)
>mm_chr12_121036402_121037123
Length = 722
Score = 540 bits (279), Expect = e-158
Identities = 305/317 (96%), Gaps = 7/317 (2%)
Strand = Plus / Plus
Query: 5 gaattctttgtttttctctgtgccccatttttaataggttaatttgtttctctggagtct 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctctgtgccccatttttaataggttaatttgtttctctggagtct 264
Query: 65 accttcttgagttccttgtatatattggttattagccctttatcggatgtaggattggtg 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accttcttgagttctttgtatatattggttattagccctttatcggatgtaggattggtg 324
Query: 125 gaagataaagatcttccaaatctgcaatcaactttgaatgtataaataaatttctttgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaagataaagatcttccaaatctgcaatcaactttgaatgtataaataaatttctttgaa 384
Query: 185 tttatatataaatttcaccaacatgtacaatgttcattatttttttaattcatacaccaa 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 tttatatataaatttcaccaacatgtacaatgttcattatttttt-aattcatacaccaa 443
Query: 245 tctaactattga------cctaatctaaatataggttatattcaaaaggatatttttgcc 298
||||||| |||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 tctaacttttgaatctaacctaatctaaatataggttagattcaaaaggatatttttgcc 503
Query: 299 cttggcaagcacatata 315
|||||||||||||||||
Sbjct: 504 cttggcaagcacatata 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 722
Length adjustment: 9
Effective length of query: 308
Effective length of database: 713
Effective search space: 219604
Effective search space used: 219604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_g15.g1 MSMg01no263_g15.g1 CHROMAT_FILE:
MSMg01no263_g15.g1 PHD_FILE: MSMg01no263_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:19 2005
(648 letters)
>mm_chr12_121178815_121179862
Length = 1048
Score = 924 bits (478), Expect = 0.0
Identities = 484/486 (99%)
Strand = Plus / Minus
Query: 1 accacacattgagcttagactccttagcttgaagaattttaaggaggtgtttaagccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 accacacattgagcttagactccttagcttgaagaattttaaggaggtgtttaagccatg 427
Query: 61 ctgcattgtcagatgactaattggtgattataagatgactaatccattgagctggccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctgcattgtcagatgactaattggtgattataagatgactaatccattgagctggccaac 367
Query: 121 attttaagggctgagtcttggtgatcagaagtgtgatggagaagatctatcagtctccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 attttaagggctgagtcttggtgatcagaagtgtgatggagaagatctatcagtctccac 307
Query: 181 aagtaatccttgaatttcttcctaaattcgtggagtataattggaggatatgaatctata 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 306 aagtaatccttgaatttcttcctaaattcatggagtataattggaggatatgaatctata 247
Query: 241 atgttacataaaaattatgaaatggtaatagccaatctcccctcccccaaatttggtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgttacataaaaattatgaaatggtaatagccaatctcccctcccccaaatttggtgag 187
Query: 301 ggttataagctttaggtctaaagaccttaatcaagtacaagtacgataggcaaagtagga 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 186 ggttataagctttaggtctaaagaccttaatcaagtacaagtaggataggcaaagtagga 127
Query: 361 taaacacaccacgagacaagtcaatcaaatttctagaagccagcaataaatattaaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 taaacacaccacgagacaagtcaatcaaatttctagaagccagcaataaatattaaaact 67
Query: 421 ttaaaagaaacaaagaaagggggaagactatatgggaataaaggcaaagttctaatacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttaaaagaaacaaagaaagggggaagactatatgggaataaaggcaaagttctaatacta 7
Query: 481 aaacta 486
||||||
Sbjct: 6 aaacta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
