TTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAGGATCCGC
GGAATTCCTAGTATATTACAATATATTTATAATGTTAGTCTCAATACTCT
TTTATTTGATTTATTAGATTCAGTTTGCTGATAATTTGTTTGGGATTTCT
GCATCTATGTATGTGAAATATATTAACTAGTCAGGTCTTTTTTGTTTTTT
TTTCTTTCACCAAAATAATACTTTGTTTCACAAATTTTGACCAATTATTA
GTCTCAAGTTATACACACACACACACACACACACACACACACACACACAC
ACAAAATCTTTTCAGCTGTTAAGTGTGCAAGATGAAGAAAATTTTAGTTA
GAAGGGGATGCACCTGTTTTTATAACCCCCTCCCCCCCTATATGCACGTT
TCAAAACTGGTGAGTCCCAAGTCCATTCATGAACTCTAGGCCTGCCAGAA
TCATGTGCAGTGTATTAAAGCTAAACTATTTTAATAGCTTATTAATTATG
CATAAATCAGGTCAAGCAATGTGTCAATATGTAACAGACTGTGCACTTTA
ACTGAACATGGCAATATATTCACTCTATTGAACTTTACATTATCATTTGA
TGTCAAACAATGAAGCAAATCCCAACAGTATCTACAAAACCAGCTTTGTA
TTTACAAAGGATTGTTTCCCATACTGATTATCCCAGGCAGCTAATTCATT
GGTTTATGCAAGTTTATTGAGGAAAAATAGATCAATTATTATTTGATCAC
CCATC

CGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCAAAGAGCACATCACAGTTCCTG
TGTCCAAATCTTGTCTGTGAATCAAAATGAGACAGCCAAGCCTTTCCACA
GATGAAGAAGGACCTTTAAAACCCTGCTACTGACCAATTATTTTCTATAT
ATGTTATAAATTTTATAAACACTCAGTATTCTGCACTCAGTGTTAATTTG
CTGAGGTTGTATTTATTGTGAATTGTGACCATAAGTTTTATTGAAGACAC
ATTCTTGTACTTGTCATGTGATACATATATATATATATATGCTTTAATTT
TTTTATATGTATATATATATACAGATATATATATATATATATCTGAAGTG
ATTAAAGCATTTTAATCTACATTCAATTTCATTTAAATTCATATTGTAAA
TATTAAATTTATAAGTGTTAAAATATAAATAAGTAAGCCCTACTCTCTAA
ATATTGACATTATAATCCTGTAAAATAATTTTAGTAGGAGGTAAAGCCTT
ATAGAGTTAAATCCAGACTGCGGGTTCATCCTAAGTGTTATGAATGCCTT
ATAGGGGAGGCCCCATAGTGTCACATCGCCCTTCCTCTATGCCTGTCAGA
GATGTGAGGCATCATCTTTGACCAGAAAGTCCAGCCTCATTCAATACTAA
ATTGTGGAGAGCTGGTATGTGCTGCGAGCAATCGCGTGCATGCCGCCAGT
N

Query= MSMg01no263_j02.g1 MSMg01no263_j02.g1 CHROMAT_FILE:
MSMg01no263_j02.g1 PHD_FILE: MSMg01no263_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:31 2005
         (675 letters)



>mm_chr12_61821658_61822732
          Length = 1075

 Score = 1069 bits (553), Expect = 0.0
 Identities = 617/657 (93%), Gaps = 32/657 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaaagagcacatcacagttcctgtgtccaaatcttgtctgtgaatcaaaatgagacagc 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaaagagcacatcacaggtcctgtgtccaaatcttgtctgtgaatcaaaatgagacagc 260

                                                                       
Query: 61  caagcctttccacagatgaagaaggacctttaaaaccctgctactgaccaattattttct 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 caagcctttccacagatgaagaaggacatttaaaaccctgctactgaccaattattttct 320

                                                                       
Query: 121 atatatgttataaattttataaacactcagtattctgcactcagtgttaatttgctgagg 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 atatatgttataaattttataaacactcagtattctgcactcagtattaatttgctgagg 380

                                                                       
Query: 181 ttgtatttattgtgaattgtgaccataagttttattgaagacacattcttgtacttgtca 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ttgtatttattgtgaattgtgaccataagttttattgaagacacatccttgtacttgtca 440

                                                                       
Query: 241 tgtgatacatatatatatatatatgctttaatt--tttttatatgtatatatatatacag 298
           ||||||||||||||||||||||  |||||||||  ||                    |||
Sbjct: 441 tgtgatacatatatatatatat--gctttaattactt--------------------cag 478

                                                                       
Query: 299 atatatatatatatatatctgaagtgattaaagcattttaatctacattcaatttcattt 358
           ||||||||||        ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atatatatat--------ctgaagtgattaaagcattttaatctacattcaatttcattt 530

                                                                       
Query: 359 aaattcatattgtaaatattaaatttataagtgttaaaatataaataagtaagccctact 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aaattcatattgtaaatattaaatttataagtgttaaaatataaataagtaagccctact 590

                                                                       
Query: 419 ctctaaatattgacattataatcctgtaaaataattttagtaggaggtaaagccttatag 478
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 591 ctctaaatattgacattataatcctgtaaaataattttagtaggaggtgaagccttatag 650

                                                                       
Query: 479 agttaaatccagactgcgggttcatcctaagtgttatgaatgccttataggggaggcccc 538
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 651 agttaaatccagactgcgggttcatcctaactgttatgaatgccttataggggaggcccc 710

                                                                       
Query: 539 atagtgtcacatcgcccttcctctatgcctgtcagagatgtgaggcatcatctttgacca 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 atagtgtcacatcgcccttcctctatgcctgtcagagatgtgaggcatcatctttgacca 770

                                                                    
Query: 599 gaaagtccagcctcattcaatactaaattgtggagagctggtatgtgctgcgagcaa 655
           |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 771 gaaagtccagcctcattcaatactaaattgtggagagccggtacgtgctgcgagcaa 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)