Query= MSMg01no263_j03.b1 MSMg01no263_j03.b1 CHROMAT_FILE:
MSMg01no263_j03.b1 PHD_FILE: MSMg01no263_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:31 2005
(370 letters)
>mm_chr12_39949868_39950637
Length = 770
Score = 530 bits (274), Expect = e-155
Identities = 322/338 (95%), Gaps = 4/338 (1%)
Strand = Plus / Plus
Query: 5 gaattcaatatacttatttgaaataaacaggcaattttgacttgtcctgtaacaaatgga 64
||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 205 gaattcaatatacttctttgaaataaacaggcaatttcgacttgtcctgtgacaaatgga 264
Query: 65 ttaacttctacgtcctggaaagatgatattaag-aagaacacagataacccagaacttct 123
| |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 265 tcaacttctaagtcctggaaagatgatattaagaaag-acacagataacccagaacttct 323
Query: 124 taattacttggaaaatttgtattcaggaaaacgtttgtaaaatctatgttact-caggat 182
|||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 324 aaattacctggaaaatttgtattcaggaaaacttttgtaaaatctatgttactccaggat 383
Query: 183 tctgttggctgcttttgaatactggccattaaagctggggacagtcctgaagcggggtcc 242
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 tctgttggctgcttttggatactggccattaaagctggggacagtcctgcagcggggtcc 443
Query: 243 ttttcacccctttgaacaccattgggtcatgcacagtgttttccaaaaccactgagtgtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttcacccctttgaacaccattgggtcatgcacagtgttttccaaaaccactgagtgtg 503
Query: 303 atcagcttagcgagtatataattattttgaaatccttg 340
| ||||||||||||| |||||||||||||||||||||
Sbjct: 504 aggagcttagcgagta-ataattattttgaaatccttg 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_j03.g1 MSMg01no263_j03.g1 CHROMAT_FILE:
MSMg01no263_j03.g1 PHD_FILE: MSMg01no263_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:31 2005
(285 letters)
>mm_chr12_40106246_40106929
Length = 684
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 agagcaaattcatttttattaactttgttatagcttctaggggctttctcgtttctttct 60
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 484 agagcaaattcatttttattaactttgttacagcttctaggggctttct-gtttctttct 426
Query: 61 cctgctccactagctctcatgcaaccaactattttaaaagttttttccattagatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cctgctccactagctctcatgcaaccaactattttaaaagttttttccattagatataaa 366
Query: 121 ttttaggattttgctaaatattttgtttctcttacatagttcaatgccctgtgtttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttttaggattttgctaaatattttgtttctcttacatagttcaatgccctgtgtttattt 306
Query: 181 ttaacatttaacatatgcatacaagtacagtttcttttacatttttatctttttatggag 240
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 305 ttaacatctaacatatgcatacaagtatagtttcttttacatttttatctttttatggag 246
Query: 241 aatctatattttttaaaccacaatggtattcatgttttgttgagg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aatctatattttttaaaccacaatggtattcatgttttgttgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
