Query= MSMg01no264_l18.b1 MSMg01no264_l18.b1 CHROMAT_FILE:
MSMg01no264_l18.b1 PHD_FILE: MSMg01no264_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:00 2005
(345 letters)
>mm_chr12_68309037_68309783
Length = 747
Score = 632 bits (327), Expect = 0.0
Identities = 342/347 (98%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 1 tgaggtataaaattacatgcataaatcaagtgtatctaggttactatttttcttatatat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 547 tgaggtataaaattacatgcataagtcaagtgtatctaggttactatttttcttatatat 488
Query: 61 aactatcacatgctgttaataattaacaaataagtgagttgaatgtctataaaagctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aactatcacatgctgttaataattaacaaataagtgagttgaatgtctataaaagctata 428
Query: 121 atggacatttgtaagcaaaataaaaaatgaactatactacatatctgaaaaataga-ttt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 427 atggacatttgtaagcaaaataaaaaatgaactatactacatatctgaaaaatagaattt 368
Query: 180 ttt-tgtatgttcaaaatctaatgcctaggtttcttaaaaattgttcttaaattgatcca 238
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tttgtgtgtgttcaaaatctaatgcctaggtttcttaaaaattgttcttaaattgatcca 308
Query: 239 gaaacacatcagtgacttaaatactgagttcttgtcattcacttttcatatggttatctt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaaacacatcagtgacttaaatactgagttcttgtcattcacttttcatatggttatctt 248
Query: 299 cccagcaaacaatagagcattgtagagtttcaacagtgtagggcaag 345
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 247 cccagcaaacattagagcattgtagagtttcaacagtgtagggcaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 747
Length adjustment: 9
Effective length of query: 336
Effective length of database: 738
Effective search space: 247968
Effective search space used: 247968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_l18.g1 MSMg01no264_l18.g1 CHROMAT_FILE:
MSMg01no264_l18.g1 PHD_FILE: MSMg01no264_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:00 2005
(291 letters)
>mm_chr12_68238772_68239462
Length = 691
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Plus
Query: 1 tcactgggtgccactcctagatgaagaactctaggcaataaaagactgctgagagaggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tcactgggtgccactcctagatgaagaactctaggcaataaaagactgctgagataggag 260
Query: 61 gaaacagacttctccaaagatgagactctgaaatactttcagaaatgcatctgtatacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaacagacttctccaaagatgagactctgaaatactttcagaaatgcatctgtatacag 320
Query: 121 ggatttctgattgaatatgatctagtgtaggtgtaagaactctaattttacttaaggtat 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ggatttctgattgaatatgatctagtgtaggtgtaagaactctaattttatttaaggtat 380
Query: 181 tttggtaatcaataaaaatatcctatgtaactattttattatattacacaataatgttta 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tttggtaatcaataaaaatatcctatgtaactattttactatattacacaataatgttta 440
Query: 241 aaatatctaattatatgttatcaatgacctctcagtggtggctaccta 288
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatatctaaatatatgttatcaatgacctctcagtggtggctaccta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
