Query= MSMg01no264_p09.b1 MSMg01no264_p09.b1 CHROMAT_FILE:
MSMg01no264_p09.b1 PHD_FILE: MSMg01no264_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:17 2005
(279 letters)
>mm_chr12_72722286_72722964
Length = 679
Score = 532 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Minus
Query: 1 aacaggtgaaggctaaggcttcctgggtactaagagactcagtcagccaattcaaacagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aacaggtgaaggctaaggcttcctgggtactaagagactcagtcagccaattcaaacaga 420
Query: 61 cgtgactgtcagtactgtggtaaggagctggtgggtggtttgcagacgggaaatagggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cgtgactgtcagtactgtggtaaggagctggtgggtggtttgcagacgggaaatagggga 360
Query: 121 tgtggaatgtttgggtgaacaataaaattccttttatacccttgaggcaaatgctctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgtggaatgtttgggtgaacaataaaattccttttatacccttgaggcaaatgctctagt 300
Query: 181 tcagggtcgaggttaatggagttcgaaaagatggttcttccaagggtctaatggtcctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcagggtcgaggttaatggagttcgaaaagatggttcttccaagggtctaatggtcctgt 240
Query: 241 ttttatcggaagttacatgctgtattctcttttttgttg 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttttatcggaagttacatgctgtattctcttttttgttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_p09.g1 MSMg01no264_p09.g1 CHROMAT_FILE:
MSMg01no264_p09.g1 PHD_FILE: MSMg01no264_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:17 2005
(285 letters)
>mm_chr12_72598383_72599066
Length = 684
Score = 466 bits (241), Expect = e-136
Identities = 274/285 (96%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 1 tgtaacattgacaatgacaactctatgctgaacatgagacacgaggcccgagagcaggct 60
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 201 tgtaacattgacaatgacaactctatgctgaacatgaaacacgagggttgagagcaggct 260
Query: 61 ggtatcaatgctttgtatcaaggagagcaatgactccagagagggctaggcagcccaaga 120
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ggtatcgatgctttgtatcaaggagagcaatgactccagagagggc-aggcagcccaaga 319
Query: 121 gggcatgcaggctgggactgtgaagtggaggaccccagggaaacacgggactggagaggc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 320 gggcatgcaggctgggactgtgaagtggaggaccccagggaaacatgggactggagaggc 379
Query: 181 taaagcacacttaacaattctaattccagatttcctattctcaactctgagatcggttct 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 380 taaagcacacttaacaattctaattccagatatcctattctcaactctgagatcagttct 439
Query: 241 gatga-tatcctgacacgcatggacccatacagtgtctagtgtcg 284
||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatgagt-tcctgacacgcatggacccatacagtgtctagtgtcg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
