Query= MSMg01no267_i04.b1 MSMg01no267_i04.b1 CHROMAT_FILE:
MSMg01no267_i04.b1 PHD_FILE: MSMg01no267_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:36 2005
(321 letters)
>mm_chr12_68309401_68310120
Length = 720
Score = 578 bits (299), Expect = e-169
Identities = 311/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 5 gaattccttctccaaacactgactgttcagcactttatccaagtgggataagatggatgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattccttctccaaacactgactgttcagcactttatccaagtgggataagatggatgt 459
Query: 65 tctatgcacattgaacattgtgatcatattgccaaggggtgtgcactaccaccatttcgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tctatgcacattgaacattgtgatcatattgccaaggggtgtgcactaccaccatttcgt 399
Query: 125 aaacacaaactgcaaattaaaatacaatggaatgtgaaagaacagagttaaaaagatgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaacacaaactgcaaattaaaatacaatggaatgtgaaagaacagagttaaaaagatgag 339
Query: 185 ctaaatgcatgttcagaaaaatgcacccatgtttgagagtacttataggataatgctttt 244
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 338 ctaaatgcatgttcagaagaatgcacccacgtttgagagtacttataggataatgctttt 279
Query: 245 ggcccctaggtcttggccacctttaagtttatgtacttcattcagatcttagatgcatgc 304
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 278 ggcccctaggtcttggccacctttaagtttatgtacttca-ccagatcttagatgcatgc 220
Query: 305 tctattttagatgaa 319
|||||||||||||||
Sbjct: 219 tctattttagatgaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_i04.g1 MSMg01no267_i04.g1 CHROMAT_FILE:
MSMg01no267_i04.g1 PHD_FILE: MSMg01no267_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:36 2005
(340 letters)
>mm_chr12_68239082_68239821
Length = 740
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Plus
Query: 1 gatattcaaggatcttttaatttgtgtcacaaattctgcttgtactgtaggtacctgaat 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatatacaaggatcttttaatttgtgtcacaaattctgcttgtactgtaggtacctgaat 260
Query: 61 ttgaggtaattacttatacctgtatttcattttttcacctgtacaacggagatggtaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaggtaattacttatacctgtatttcattttttcacctgtacaacggagatggtaata 320
Query: 121 tgcaactcaatagatgatataagaactaaacaagaatgcaaatacagtgcttaggaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaactcaatagatgatataagaactaaacaagaatgcaaatacagtgcttaggaaaaa 380
Query: 181 ccgagatgttaaagatagctttaaagtaattaaaaccgatatttgtgtgcataggataaa 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ccgagatgttaaagatagctttaaagtaattaaaacagatatttgtgtgcataggataaa 440
Query: 241 gccagaggagatgagggcagtttacaaaaggagatttgattgactctcataatcagcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccagaggagatgagggcagtttacaaaaggagatttgattgactctcataatcagcaca 500
Query: 301 tgttgaatatctaataagctacctgctgacactcgatttt 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttgaatatctaataagctacctgctgacactcgatttt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
