Query= MSMg01no267_p06.b1 MSMg01no267_p06.b1 CHROMAT_FILE:
MSMg01no267_p06.b1 PHD_FILE: MSMg01no267_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:08 2005
(276 letters)
>mm_chr12_67252439_67253114
Length = 676
Score = 503 bits (260), Expect = e-147
Identities = 269/272 (98%)
Strand = Plus / Plus
Query: 5 gaattcctgatatttccaagacttttatcatgaaggggtgttgtattttgtcaaatgctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgatatttccaagacttttatcatgaaggggtgttgtattttgtcaaatgctt 264
Query: 65 tctcagcatctaatgagatgatcatatggtttttgtctttgagtttgtttatatagcgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctcagcatctaatgagatgatcatatggtttttgtctttgagtttgtttatatagcgca 324
Query: 125 tctgtttttaaacaagctattaacttaaaactttctgtagcaactcctggtttcctgatg 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 tctgtttttaaacaagctattaacttaaaagtttctgtagcaactcctggtttcctgatg 384
Query: 185 gtccctagtgagagaaatctgacagtacactgggtcactgggactgtctctgtgacggtt 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctctagtgagagaaatctgacagtacactgggtcactgggactgtctctgtgacggtt 444
Query: 245 tgcttgacatgagaaaggatattgcagcttta 276
||||||| ||||||||||||||||||||||||
Sbjct: 445 tgcttgagatgagaaaggatattgcagcttta 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no267_p06.g1 MSMg01no267_p06.g1 CHROMAT_FILE:
MSMg01no267_p06.g1 PHD_FILE: MSMg01no267_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:08 2005
(649 letters)
>mm_chr12_67414777_67415827
Length = 1051
Score = 1224 bits (633), Expect = 0.0
Identities = 646/651 (99%), Gaps = 2/651 (0%)
Strand = Plus / Minus
Query: 1 ttttcactttgtattgaaaccttgggagtagaaccgtgaattcagagtttatactttatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 696 ttttcactttgtattgaaaccttgggagtagaaccgtgaattcagagtttatgctttatg 637
Query: 61 agttttggctaatattcctgattacctatccttttacaaagtatgcttctacacttccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 agttttggctaatattcctgattacctatccttttacaaagtatgcttctacacttccac 577
Query: 121 aatagaacaattacaagcctgcttcattatgcctttccatcatgtttaataaactgtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aatagaacaattacaagcctgcttcattatgcctttccatcatgtttaataaactgtagg 517
Query: 181 tagtttaatctggttttggttcttttaaatttgtattattcatctattcttatgactaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tagtttaatctggttttggttcttttaaatttgtattattcatctattcttatgactaag 457
Query: 241 ggccaacagaccatttattcttacatcatattatttataaagatgttaagattcaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggccaacagaccatttattcttacatcatattatttataaagatgttaagattcaattct 397
Query: 301 ttgcaaacctaagagcacagatactatattcctaatactggtgtgccccagatatcacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttgcaaacctaagagcacagatactatattcctaatactggtgtgccccagatatcacag 337
Query: 361 accctttgacacttaatttccttaatttcttttacaaaaggaattaaatactaatgtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 accctttgacacttaatttccttaatttcttttacaaaaggaattaaatactaatgtatt 277
Query: 421 ctccacttgaattttcttaaacaaagtattgatcttgtcg--ttttttttccttgctgat 478
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 276 ctccacttgaattttcttaaacaaagtattgatcttgtcgttttttttttccttgctgat 217
Query: 479 ctcagcatgcttttaaaaatcagtagctaacatcaaagtaaatggtgagaagctggaagc 538
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 216 ctcagcatgcttttaaaaatcagtagccaacatcaaagtaaatggtgagaagctggaagc 157
Query: 539 aatcccactaaaatcagggactagacaaggctgcccactttctccctacctattcaacac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aatcccactaaaatcagggactagacaaggctgcccactttctccctacctattcaacac 97
Query: 599 tgtacttgaagtcctagccagaacaattcgacaacaaaaggagatcaaggg 649
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 96 tgtacttgaagtcctagccagaacaattcgacaataaaaggagatcaaggg 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1051
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1041
Effective search space: 665199
Effective search space used: 665199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
