TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGGATCCGCGGAA
TTCTTAGATTTCTTGAAAAGCTGAGTTTTTGGTGCTCTGGTCCTACAGCA
AGCTTTGTGAAGGTGCCAAAGACTCAAGGCAGTACCCTACAGAGCCACAG
GGTTTATCCCTATGAGTGACAACAAAGCTCTGAGTTTGCAGCACCAGCTG
CAGCTGTTAATCTGTTATTGGTTCAGTCTTACAGAAGCCAACGAACCAAT
CTTCCCCCCCCCCCTTATGAGTTCATGCATGATGAAAGTAGCCACAAGCA
TAGTTAGTTTCAAATTATTAGTTCAACTCCTGTCTTAAAATAATTCAGAC
CAAGGGTACAAGAAATGCTATATAGAATATTAGCAACTTTAAAAATTTAC
AGACTTTCTGGGATCCAAAGCACTGAGATTCTCACAACCTCAGTTATCTG
ACCAAACTATGCTGCTAGTGAGTGATTCAATTGATGGCACAATCTTTTGA
TATTTTTATTATTGTTTAGGGGAACTTTGCAAATGAAATCACATTATTGA
GAGCCCTTGATAAATGGAGCCCCATGATGTCATCTAGGAAGTAGCCCATG
GTAATTCTGCGATATATGCTTCTAGAAAATTCTGTCTTCAAGGAAGCTAG
ATGACTCAGAGGAGAGTGAAGAATAGGAGTCTAGATAGTGGGGTTGAAAC
TGTAGCACATTTAAAAAGTTCCCCTTTTCATTN

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGTAGGCTTCTTGTATGTTCATGGGCATCTC
TTTCTTTAGATTTGGGAACTTTTCTTCTATTATTTTATTGAAGATGTTTG
CTGGTCCTTTGAGTTGAAAATCTTCATTCTCATCCACTCCTGTTATCAGT
AGGTTTGGTCTTCTCATTGTGTCCTAGATTTCCTGGATGTTTTGAGTTAG
CATCTTTTTGCATTTTCCATTTTCTCTGATTGTTGTGTCCATGTTCTGTA
TGGAATCTTCTGTACCTGATATTCTCTCTTCCATCTCTTGTATTCTGTTG
CTGATGCTCACATCTATGGTTCCTGATTTCTTTCCTAGGATTTCTATCTC
CAGAGTTGNCCCTCTTTGTGATTTCTTTATTGTTTCTACTTCCATTTTTA
GATCCTGGATGGTTTTGTTCAATTCTTTCACCTGTTTGGTACTGATTTCC
TGTAACTCTTTAAGGGATTTTTAGTGTTTCCTCTTTAACAGCTTCTAGCT
GTTTCCTGTGATTTCCTGTATTTCTTTAAGGGAATTATTTAATTCCTTCT
TAAAATCCTCCAGCATCATCATGAGAAGTGACTTTAGATCAATATCTTGC
TTTTCTGTTTTGATGGTGTATCCAGGACTTGCTATGGTGGGAGAGTTTGG
TTTTGATGATGCCAAGTAACCATGATTTCTGTTGCTTTTGTTTA

Query= MSMg01no271_a09.b1 MSMg01no271_a09.b1 CHROMAT_FILE:
MSMg01no271_a09.b1 PHD_FILE: MSMg01no271_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:49 2005
         (693 letters)



>mm_chr12_6397228_6398316
          Length = 1089

 Score = 1251 bits (647), Expect = 0.0
 Identities = 675/687 (98%), Gaps = 6/687 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   ggaattcttag-atttcttgaaaagctgagtttttggtgctctggtcctacagcaagctt 65
           ||||||||||| |  | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 ggaattcttagaaagtgttgaaaagctgagtttttggtgctctggtcctacagcaagctt 829

                                                                       
Query: 66  tgtgaaggtgccaaagactcaaggcagtaccctacagagccacagggtttatccctatga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tgtgaaggtgccaaagactcaaggcagtaccctacagagccacagggtttatccctatga 769

                                                                       
Query: 126 gtgacaacaaagctctgagtttgcagcaccagctgcagctgttaatctgttattggttca 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gtgacaacaaagctctgagtttgcagcaccagctgcagctgttaatctgttattggttca 709

                                                                       
Query: 186 gtcttacagaagccaacgaaccaatcttcccccccccccttatgagttcatgcatgatga 245
           ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||
Sbjct: 708 gtcttacagaagccaacgaaccaatctt-----ccccccttatgagttcatgcatgatga 654

                                                                       
Query: 246 aagtagccacaagcatagttagtttcaaattattagttcaactcctgtcttaaaataatt 305
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 653 aagtagccacaagcatagttagtttcaaattaaaagttcaactcctgtcttaaaataatt 594

                                                                       
Query: 306 cagaccaagggtacaagaaatgctatatagaatattagcaactttaaaaatttacagact 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cagaccaagggtacaagaaatgctatatagaatattagcaactttaaaaatttacagact 534

                                                                       
Query: 366 ttctgggatccaaagcactgagattctcacaacctcagttatctgaccaaactatgctgc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttctgggatccaaagcactgagattctcacaacctcagttatctgaccaaactatgctgc 474

                                                                       
Query: 426 tagtgagtgattcaattgatggcacaatcttttgatatttttattattgtttaggggaac 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tagtgagtgattcaattgatggcacaatcttttgatatttttattattgtttaggggaac 414

                                                                       
Query: 486 tttgcaaatgaaatcacattattgagagcccttgataaatggagccccatgatgtcatct 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttgcaaatgaaatcacattattgagagcccttgataaatggagccccatgatgtcatct 354

                                                                       
Query: 546 aggaagtagcccatggtaattctgcgatatatgcttctagaaaattctgtcttcaaggaa 605
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aggaagtagcccacggtaattctgcgatatatgcttctagaaaattctgtcttcaaggaa 294

                                                                       
Query: 606 gctagatgactcagaggagagtgaagaataggagtctagatagtggggttgaaactgtag 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gctagatgactcagaggagagtgaagaataggagtctagatagtggggttgaaactgtag 234

                                      
Query: 666 cacatttaaaaagttccccttttcatt 692
           |||||||||||||||||||||||||||
Sbjct: 233 cacatttaaaaagttccccttttcatt 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1089
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1079
Effective search space:   736957
Effective search space used:   736957
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)