Query= MSMg01no271_b15.b1 MSMg01no271_b15.b1 CHROMAT_FILE:
MSMg01no271_b15.b1 PHD_FILE: MSMg01no271_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:54 2005
(245 letters)
>mm_chr12_51632298_51632941
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 2 aatgcatcctgagcaatttgctttatctcagactgttttactttgaggcacttcccctgg 61
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 202 aatgcatcctgagcaatttgctttatctcagactgttttgctttgagg-acttcccctgg 260
Query: 62 gttttgagtgttacttgaaacaaccaaaaaatccttagtgaaacaaaaaacatgattgcg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttgagtgttacttgaaacaaccaaaaaatccttagtgaaacaaaaaacatgattgcg 320
Query: 122 tatgtatcattaggtaaaggaaatgagtctaagtgtaaatctttccactaaataactatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtatcattaggtaaaggaaatgagtctaagtgtaaatctttccactaaataactatt 380
Query: 182 tttatcaaaacacaattttgtttgtttaaaaatattttgtttctgttgtttggttttgga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttatcaaaacacaattttgtttgtttaaaaatattttgtttctgttgtttggttttgga 440
Query: 242 actc 245
||||
Sbjct: 441 actc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no271_b15.g1 MSMg01no271_b15.g1 CHROMAT_FILE:
MSMg01no271_b15.g1 PHD_FILE: MSMg01no271_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:54 2005
(204 letters)
>mm_chr12_51746994_51747598
Length = 605
Score = 333 bits (172), Expect = 6e-96
Identities = 175/176 (99%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 1 ttgtgctgtgactgcagtagtgggcagcttgcaaatgtggaggtaaggaagtt-gggggg 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 328 ttgtgctgtgactgcagtagtgggcagcttgcaaatgtggaggtaaggaagttggggggg 269
Query: 60 ggcttttatcctttgtctcatgctttctcttatgcttcctgaagacattaactacgagga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggcttttatcctttgtctcatgctttctcttatgcttcctgaagacattaactacgagga 209
Query: 120 agaatgacgagagagagagagagagagagagagagagagagagagagagagagaga 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 agaatgacgagagagagagagagagagagagagagagagagagagagagagagaga 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 605
Length adjustment: 8
Effective length of query: 196
Effective length of database: 597
Effective search space: 117012
Effective search space used: 117012
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
