Query= MSMg01no271_c22.b1 MSMg01no271_c22.b1 CHROMAT_FILE:
MSMg01no271_c22.b1 PHD_FILE: MSMg01no271_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:00 2005
(317 letters)
>mm_chr12_3411182_3411898
Length = 717
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 5 gaattcactatgtaataagtacggtcttcctgtttgctttacctctcccccagggccctg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattcactatgtagtaagtacggtcttcctgtttgctttacctctcccccagggccctg 458
Query: 65 tggatgccaggcaagcctcaaaacactaggttatgtcagctttttttccctaattttcac 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 457 tggatgccaggcaagcctcaaaacactaggttatgtcagcttttttcccctaattttcac 398
Query: 125 catttctctatttgtttggctttggaggatagactcggtttgtgtggacccccagaatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 catttctctatttgtttggctttggaggatagactcggtttgtgtggacccccagaatgg 338
Query: 185 aatctcttcctcaggactcatacttgagtatgtgctgcccaaagcactattaacaagcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aatctcttcctcaggactcatacttgagtatgtgctgcccaaagcactattaacaagcct 278
Query: 245 ttcacactgtgtccattcaacagtcagcgaatgaatgattataatctttactgataaagt 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 277 ttcacactgtgtccattcaacagtcagcgaatgaatgactataatctttactgataaagt 218
Query: 305 gaggaatgttata 317
|||||||||||||
Sbjct: 217 gaggaatgttata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_c22.g1 MSMg01no271_c22.g1 CHROMAT_FILE:
MSMg01no271_c22.g1 PHD_FILE: MSMg01no271_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:00 2005
(685 letters)
>mm_chr12_3250805_3251888
Length = 1084
Score = 1236 bits (639), Expect = 0.0
Identities = 672/685 (98%), Gaps = 5/685 (0%)
Strand = Plus / Plus
Query: 1 actttctctaggaacttctagctctgtctttctctaacttaactgaaatcacctcagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 actttctctaggaacttctagctctgtctttctctaacttaactgaaatcagctcagcta 260
Query: 61 gaaaaggggcactaacctaacagaaaaggaaaccagggattctttagatttgtgaagatt 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaggggcactaacccaacagaaaaggaaaccagggattctttagatttgtgaagatt 320
Query: 121 attattattttattattttgagacagggtctatgtatgtagatttgagtgacctggaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attattattttattattttgagacagggtctatgtatgtagatttgagtgacctggaact 380
Query: 181 cactatatagaccaagttggcctttcacagagatccatatgcctctgtctcccaggatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactatatagaccaagttggcctttcacagagatccatatgcctctgtctcccaggatta 440
Query: 241 aaagtgtacaccactatactcagcagttttttgatttttaaggaaaggatcccacagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagtgtacaccactatactcagcagttttttgatttttaaggaaaggatcccacagtgg 500
Query: 301 tacacaggctaaccttgatctcagtatgcagttctgcctctaccatcccaacggaggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacacaggctaaccttgatctcagtatgcagttctgcctctaccatcccaacggaggaat 560
Query: 361 tcaaaatgtgtgccaatatgctttacttcaaaacgtcttttccatcttcaaaacagatta 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 tcaaaatgtgtgccaatatgctttacttcaaaatgtcttttccatcttcaaaacagatta 620
Query: 421 gcttacaaggtaggtttccattacattttcatgtataaagggctataatttcctttcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcttacaaggtaggtttccattacattttcatgtataaagggctataatttcctttcttt 680
Query: 481 tctgagatagcatatcttactatatccacagctatcatagtactatgcagactaagctag 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 tctgagatagcatatcttactatatccacagctataatagtactatgcagactaagctag 740
Query: 541 tgtagaacccagaaccttaggcatactaaccaagtgctctggcactgacctgatttctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtagaacccagaaccttaggcatactaaccaagtgctctggcactgacctgatttctca 800
Query: 601 gcccaattaatacttaagaagcaaaaacagtaaatgtttacataatttagagatttaaaa 660
||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 801 gccgaattgatacttaagaagcaaacacagtaaatgtttacataatttagagatttataa 860
Query: 661 caaaaaaaaaaaaaacaactccctt 685
|||||||||||||| ||||||
Sbjct: 861 --aaaaaaaaaaaaac---tccctt 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1084
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1074
Effective search space: 724950
Effective search space used: 724950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
