Query= MSMg01no272_d06.b1 MSMg01no272_d06.b1 CHROMAT_FILE:
MSMg01no272_d06.b1 PHD_FILE: MSMg01no272_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:17 2005
(677 letters)
>mm_chr12_104744887_104745963
Length = 1077
Score = 1239 bits (641), Expect = 0.0
Identities = 665/673 (98%)
Strand = Plus / Minus
Query: 5 aagccgggcatgagggtacgtgcctataatcccagcactgtaagatgggacacagagaca 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1077 aagccgggcatgagggtacgtgcctataatcccagcactgtaagatgggagacagagaca 1018
Query: 65 aggaagatcctggaagcttgtaggcctgacatcctggcctacttaatggtgttccagacc 124
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 1017 aggaagatcctggaagcttgtaggtctgacatcctggcctacttaatgatgttccagacc 958
Query: 125 aatgaaaggctatgtctcaaacaaaaggtggcaagtgcccaaggactaatacctaaggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aatgaaaggctatgtctcaaacaaaaggtggcaagtgcccaaggactaatacctaaggtc 898
Query: 185 atgcccctgacctccatgcatgtgtcatatgtatgcacactgaacccacacatgtatccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 atgcccctgacctccatgcatgtgtcatatgtatgcacactgaacccacacatgtatccc 838
Query: 245 ttacaccgacacacacatgcatactcatcagcatactcccacaaaatctcatgctcttag 304
|| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 837 ttgcaccgacacacacatgcatacttatcagcatactcccacaaaatctcatgcacttag 778
Query: 305 aacatcatgttttgttcaccatcctcaaatgattagcacactcagtctatttaacacatc 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aacatcatgttttgctcaccatcctcaaatgattagcacactcagtctatttaacacatc 718
Query: 365 tgttacctctcctagctttgtgtgtgtggatgagacctcacacctatacccttagcacat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgttacctctcctagctttgtgtgtgtggatgagacctcacacctatacccttagcacat 658
Query: 425 agcaatgatgtaatcgatgcattactaataagtgtggtcactttgctctacactgcttct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agcaatgatgtaatcgatgcattactaataagtgtggtcactttgctctacactgcttct 598
Query: 485 acagatgtcagtcatctcagaactgcaagtcctcctttgtcctgtatccttggatgacgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 acagatgtcagtcatctcagaactgcaagtcctcctttgtcctgtatccttggatgacgt 538
Query: 545 ctcccccacttatcttacctctgatccttagcaactatccttctgttttattcagtggct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ctcccccacttatcttacctctgatccttagcaactatccttctgttttattcagtggct 478
Query: 605 ctgacgttttcagatcccacttttacaaggaaatcatatgccccgtacattagtcagtct 664
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 477 ctgacgttttcagatcccacttttacaaggaaatcatatgccccgtgcattagtcagtct 418
Query: 665 tctcattgctgta 677
|||||||||||||
Sbjct: 417 tctcattgctgta 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_d06.g1 MSMg01no272_d06.g1 CHROMAT_FILE:
MSMg01no272_d06.g1 PHD_FILE: MSMg01no272_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:17 2005
(291 letters)
>mm_chr12_104543042_104543729
Length = 688
Score = 485 bits (251), Expect = e-141
Identities = 280/291 (96%), Gaps = 3/291 (1%)
Strand = Plus / Plus
Query: 1 tacccaggtaggtctaggattaaggtcagttggaacaaactatcctacctttgctccctc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tacccaggtaggtctaggattaaggtcagttggaagaaactatcctacctttgctccctc 260
Query: 61 aacagggaccaccctgagagaattgacactctcccaaaggctatcccatctggtagaccc 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagggaccaccctgagagaatcaacactctcccaaaggctatcccatctggtagaccc 320
Query: 121 atctgacaccaggagcaatcagctttcacccaatttgcctacctttggcacccagcatat 180
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 atctgacaccaggaacaatcagctttcacccaaattgcctacctttggcacccagcatat 380
Query: 181 ggaatctggggcatacagtaggtgcacagtgagtctgagtggtggttaagctagctagcc 240
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ggaatctagggcatacagtaggtgcacagtgagtctgagttgtggttaagctagctagcc 440
Query: 241 aagagccaatgtgctgctgggtggtggtttgaataagaactgcctgttagg 291
|||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 441 aagagccaatgtgctg---ggtggtggtttgaataagaacggcctgttagg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 688
Length adjustment: 9
Effective length of query: 282
Effective length of database: 679
Effective search space: 191478
Effective search space used: 191478
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
