Query= MSMg01no272_p05.b1 MSMg01no272_p05.b1 CHROMAT_FILE:
MSMg01no272_p05.b1 PHD_FILE: MSMg01no272_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:13 2005
(298 letters)
>mm_chr12_10583797_10584495
Length = 699
Score = 540 bits (279), Expect = e-158
Identities = 291/295 (98%), Gaps = 1/295 (0%)
Strand = Plus / Plus
Query: 2 aaatgtgtattcttgattcacaacccaggaatgtcggctgtcaaagacctagcttgtatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaatgtgtattcttgattcacaacccaggaatgtcggctgtcaaagacctagcttgtatc 261
Query: 62 attgattccttccaccttaaaaacccaagtttgtgccaacaaggctgcatctcacaacta 121
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 262 attgattccttccaccttaaaaacccaagtttgtgccaacatggctgcatctcacaacta 321
Query: 122 tgaagaacatgaggcaaatgaattagatgtggttaaagaaaaaagaaaagaaaaagagaa 181
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgaagaacatgaggcacatgaattagatgtggttaaagaaaaaagaaaagaaaaagagaa 381
Query: 182 caaaggtcctgaatgtccttaggttgtatctgacttctcatttttttt-ccacatttaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 382 caaaggtcctgaatgtccttaggttgtatctgacttctcatttttttttccacatttaaa 441
Query: 241 tgtttaaacggaagatatgtagtgagacctacatttcagaaggatccctgtggtg 295
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttttaaacggaagatatgtagtgagacctacatttcagaaggatccctgtggtg 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 699
Length adjustment: 9
Effective length of query: 289
Effective length of database: 690
Effective search space: 199410
Effective search space used: 199410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_p05.g1 MSMg01no272_p05.g1 CHROMAT_FILE:
MSMg01no272_p05.g1 PHD_FILE: MSMg01no272_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:13 2005
(347 letters)
>mm_chr12_10691841_10692588
Length = 748
Score = 619 bits (320), Expect = 0.0
Identities = 341/348 (97%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 1 atagctagtaatgtataaatatttatatgtatcttcaaggtcataaaaaacaggaggcag 60
|||||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||
Sbjct: 548 atagctagtaatgtatgaatatttatatgtatcttcaaggtcatgagaaacaagaggcag 489
Query: 61 acaggaatgggctgaagagatgcatggaggtgtctcaggttgactcctgggattcctagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 acaggaatgggctgaagagatgcatggaggtgtctcaggttgactcctgggattcctagt 429
Query: 121 gccaccagctatgatgtaaataatgtcactactgaagattatttaactcacacacattct 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gccaccagctatgatgtaaatgatgtcactactgaagattatttaactcacacacattct 369
Query: 181 ttctcttagg-aaaaaaaacccatctttaacacactccatagaaaaacacagatgagtac 239
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 368 ttctcttaggaaaaaaaaacccatctttagcacactccatagaaaaacacagatgagtac 309
Query: 240 atttccaatgggttactcatcatgactttctggatttaatgttgcttccccttcagactc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atttccaatgggttactcatcatgactttctggatttaatgttgcttccccttcagactc 249
Query: 300 tgaatgtgcacactgattttcttttgcctcttaccatctgttaccatc 347
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgaatgtgcacactgattttcttttgcctcttaccatctgttaccatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
