Query= MSMg01no274_h11.b1 MSMg01no274_h11.b1 CHROMAT_FILE:
MSMg01no274_h11.b1 PHD_FILE: MSMg01no274_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:00 2005
(586 letters)
>mm_chr12_65802257_65803242
Length = 986
Score = 1069 bits (553), Expect = 0.0
Identities = 578/591 (97%), Gaps = 9/591 (1%)
Strand = Plus / Minus
Query: 5 gaattcatgtccttatcagtgttacttttgttaaatggggtgaactcaagcatgttatat 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaattcatgtccagattagtgttacttttgttaaatggggtgaactcaagcatgttatat 548
Query: 65 agcaagtccacaacgttctttaaagagtcatatattcagaaacaccagcagcttagactc 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agcaagtccacaaggttctttaaagagtcatatattcagaaacaccagcagcttagactc 488
Query: 125 tggctacaggcaatgtggaaggaggatggtttgggtcctggcagaagtgagattatgata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tggctacaggcaatgtggaaggaggatggtttgggtcctggcagaagtgagattatgata 428
Query: 185 aatgcttggcttcagccataagctccttttcacagaaaggaaggaatgttcaggctcaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aatgcttggcttcagccataagctccttttcacagaaaggaaggaatgttcaggctcaga 368
Query: 245 gagtgacaacaactgatgtggagttgagccagggaaatttattctaaggctttgaagtcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gagtgacaacaactgatgtggagttgagccagggaaatttattctaaggctttgaagtcc 308
Query: 305 cttcaacaatgttccaatgtttgccagctggggtatgtgggtctacctcctgcccatgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cttcaacaatgttccaatgtttgccagctggggtatgtgggtctacctcctgcccatgtc 248
Query: 365 ccatttcctctaaaaggttaatgtgttttgttttttgtttttt------ttttgacaaaa 418
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 247 ccatttcctctaaaaggttaatgtgttttgttttttgttttttgtttttttttgacaaaa 188
Query: 419 cttccttgggaagatgcagcacacatggctaccccccccccc---actcacctgataggg 475
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 187 cttccttgggaagatgcagcacacatggctaccccccccccccccactcacctgataggg 128
Query: 476 atctcatgacagaccaaagtaactgatagcacccaagtccaagttggtgaaccaatgagt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atctcatgacagaccaaagtaactgatagcacccaagtccaagttggtgaaccaatgagt 68
Query: 536 ttgattggggttacttaccgaaatatggatgaggggatatttgcaggaaca 586
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ttgattggggttacttaccgaaatatggatgaggggatatttgcaggaaca 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_h11.g1 MSMg01no274_h11.g1 CHROMAT_FILE:
MSMg01no274_h11.g1 PHD_FILE: MSMg01no274_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:00 2005
(551 letters)
>mm_chr12_65782846_65783795
Length = 950
Score = 1050 bits (543), Expect = 0.0
Identities = 549/551 (99%), Gaps = 1/551 (0%)
Strand = Plus / Plus
Query: 1 aatctcaggagaatgaggtatgtcaaggccttctataaggacaacgatggtgtgtgccca 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aatctcaggagaatgaggtatgtcaaggccttctataaggacaaccatggtgtgtgccca 260
Query: 61 aacttgactatagaccacctagatacaagccttccttctcaggcaggggcaaggttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttgactatagaccacctagatacaagccttccttctcaggcaggggcaaggttgaag 320
Query: 121 gctctcagtgtaggtaaaaagcctgtaaattctacctgatgcagggtctcactgatggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctcagtgtaggtaaaaagcctgtaaattctacctgatgcagggtctcactgatggag 380
Query: 181 gactggatctgagcaccaagtattcatacctgtcctcagagagtggagttttctcccagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactggatctgagcaccaagtattcatacctgtcctcagagagtggagttttctcccag- 439
Query: 241 atctatctatcaactgaagtttaaaggagagttccgggagaagtcagccatgttgggtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atctatctatcaactgaagtttaaaggagagttccgggagaagtcagccatgttgggtct 499
Query: 301 ctgcccagcccagggagtgagtcactgtagtagcctgctctgaattaagtctctatctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgcccagcccagggagtgagtcactgtagtagcctgctctgaattaagtctctatctcc 559
Query: 361 ttagtgtgggatgtcacactccacaggagcatgcttggaattggggaaggaatgacattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttagtgtgggatgtcacactccacaggagcatgcttggaattggggaaggaatgacattt 619
Query: 421 ccttccttctttcctcaaagcatcatttagtcatttaattctagcccaggggactagggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccttccttctttcctcaaagcatcatttagtcatttaattctagcccaggggactagggt 679
Query: 481 ttctctagagcttccttggctcttgagaaagtacctcagtgcatgagttagctgttcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttctctagagcttccttggctcttgagaaagtacctcagtgcatgagttagctgttcaac 739
Query: 541 ccggaatggct 551
|||||||||||
Sbjct: 740 ccggaatggct 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 950
Length adjustment: 10
Effective length of query: 541
Effective length of database: 940
Effective search space: 508540
Effective search space used: 508540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
