Query= MSMg01no275_b22.b1 MSMg01no275_b22.b1 CHROMAT_FILE:
MSMg01no275_b22.b1 PHD_FILE: MSMg01no275_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:48 2005
(370 letters)
>mm_chr12_34060458_34061230
Length = 773
Score = 706 bits (365), Expect = 0.0
Identities = 370/373 (99%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 1 tcagtgaactcttgttt---aaaaaaaaaaggaaaaaatgaaattttctatttacacctt 57
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagtgaactcttgttttaaaaaaaaaaaaggaaaaaatgaaattttctatttacacctt 260
Query: 58 atattttgttatgctgtcagcccatggcaccttaacagaattctgtgggttttatgtagc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattttgttatgctgtcagcccatggcaccttaacagaattctgtgggttttatgtagc 320
Query: 118 tggtcagtcatggggtaaattcaataactattgttgcacagacaagaatttgcacctgtt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtcagtcatggggtaaattcaataactattgttgcacagacaagaatttgcacctgtt 380
Query: 178 catttgtcctttcctactaaccaattttagaagcttttccagaagaattttgaagagagc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttgtcctttcctactaaccaattttagaagcttttccagaagaattttgaagagagc 440
Query: 238 atgtccaatcatattcaacaaaggccacactcatggagtgggtttcttttctatgatcca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtccaatcatattcaacaaaggccacactcatggagtgggtttcttttctatgatcca 500
Query: 298 tattttgtaacactaagtattttcctcctttgtcccgcccctttatacctttatgaatta 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattttgtaacactaagtattttcctcctttgtcccgcccctttatacctttatgaatta 560
Query: 358 gcgctatcagata 370
|||||||||||||
Sbjct: 561 gcgctatcagata 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 773
Length adjustment: 9
Effective length of query: 361
Effective length of database: 764
Effective search space: 275804
Effective search space used: 275804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_b22.g1 MSMg01no275_b22.g1 CHROMAT_FILE:
MSMg01no275_b22.g1 PHD_FILE: MSMg01no275_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:48 2005
(364 letters)
>mm_chr12_34201795_34202565
Length = 771
Score = 644 bits (333), Expect = 0.0
Identities = 359/371 (96%), Gaps = 7/371 (1%)
Strand = Plus / Minus
Query: 1 ctaaagaaaagttactgctgtgaatgaacactctgattgtccttcaaaatgcatttggcg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctaaagaaaagttactactgtgaatgaacactctgattgtccttcaaaatgcatttggcg 512
Query: 61 atacctccccttcctttaaaagtttccagtactatgggaataaacagctttgcttattca 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 511 atacctccccttcctttaaaagtttccagtactatgggaatgaacagctttgcttattca 452
Query: 121 ataaaca---gatatcctattttacttcttgagttatgctgcagcatttgccataccact 177
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 451 ataaacagatgatatcctattttacttcttgagttatgctgcagcatttaccataccact 392
Query: 178 ttgagttggtggtaacattttccttttctgatagtaattttaggcaggccctgaattcag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttgagttggtggtaacattttccttttctgatagtaattttaggcaggccctgaattcag 332
Query: 238 ttctaagtcaaataatggactgagatgtccttgcctgatg----gataccacattatctc 293
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 331 ttctaagtcaaataatggactgagatgtccttgcctgatggatagatatcacattatctc 272
Query: 294 caagcctgtccttactgaaagacgctatggatcgaacggtccacgcttcctttaatttgc 353
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 271 caagcctgtccttactgaaagacgctatggatcgaacggtccacacttcctttaatttgc 212
Query: 354 ttcttttagtg 364
|||||||||||
Sbjct: 211 ttcttttagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 771
Length adjustment: 9
Effective length of query: 355
Effective length of database: 762
Effective search space: 270510
Effective search space used: 270510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
