CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTCAAAACCACAGGAATCTAGCACAGAAAAGGTAAATACCCCA
TGGAGTCAGTGTTAATTAGCAAGCCAAGCTACTGAGCAAGGGCCCAGAGT
TAGGGGAGGGAAGAAAGGAATTACAAATGATCTGGGGTCTTTTCTGCCTT
TCCACTGGGTAATACGGCTGGGAAGGGCTTTGCTAGAAGAGGCCTTTTCA
AAGTCTTTTCCCACTTCTCTGACCTGGGTGCAGCCCTCAGAATCCCCCTG
GGACACTTTCATGAGCTGAGGCTACCTTTCGTTGAGTCACTGACAACTCA
CGTGGTTTCCAACTCAATATCTTTTTAAAATAAATTCTTGTTTCAGTGCA
AATTTGGCTATTAACTTTGTCTCAAAAGGGACTTTCTCAGCTCACTTACA
TCCAGATTGGATCCTCCAACAGTTGTATAATCCAGAACAAAGTCTCTTTG
GATTCTATTTTTTGACACAAAAAATGGACCACCATCATTTTGGTGAGAAC
AATACCCTATCTCTGGAAACCCAATGTCTCCTTCCTAGAAGCAAAACAGC
AACCTGCATGGGGACTGTACAGCAGCAACCTGCATGGGGACTGTACAGCA
GCAACCTGCATGGGGACTCTACAGCAGGAACCTGCATGGGGACTGTACAG
CAGCAACCTGCATGGGGACTG

ATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGTTACCCTGAGCAACCCTG
TCTCAAAAAGACCAAGCCAAAACAGACAAAAAAGGCAAAACAAAAACACC
ACCAGGTTTCCAGGAGCCACCCAGGCTGCAGCTCAGACTGCTCTTATGTA
ACTGTGTGGTAGCTTGAATGATGGGAAGTATGACTTTTCAGGCCAGCTGG
GACCTTAGTTAACTGAGTTCTAAAAGGCTTGTTTTCTTGTCTATAGCACG
AGGCAAGAAGGCCGAGAGCTTACAGCTCGATGTTTTCAAAGCCTTGAGTG
CGTGCACATACACCATACACATGCACACATACAGACACACACATACGGGG
CAAGCAATAGTAACTACATTATAGAATGCCCGGCATGCTCACCCATGAAG
CACATTTACCCCGTGGCAACAAATGCTAGCCTTTTGGCAGGATAGGAAAC
ATTTGTTGAACGAATTATCAGCCAGGGATTTTTCTTTTTTCTTTTTTTGG
TTTTTTTTTTTTTTTCGAGACAGGGTTTCTCTGTATAGGCCTGGCTGTCC
TGGAACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAAAAATCCACCTG
CCTCTGCCTCCCGAGTGACGCCTGGCTGGATTTTTCTAAGGGCCATTATT
TCACCATCTACATTTTGCAAAA

Query= MSMg01no275_k06.g1 MSMg01no275_k06.g1 CHROMAT_FILE:
MSMg01no275_k06.g1 PHD_FILE: MSMg01no275_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:24 2005
         (590 letters)



>mm_chr12_87085796_87086785
          Length = 990

 Score = 1042 bits (539), Expect = 0.0
 Identities = 573/589 (97%), Gaps = 9/589 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggttaccctgagcaaccctgtctcaaaaagaccaagccaaaacagacaaaaaaggcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggttaccctgagcaaccctgtctcaaaaagaccaagccaaaacagacaaaaaaggcaa 260

                                                                       
Query: 61  aacaaaaacaccaccaggtttccaggagccacccaggctgcagctcagactgctcttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaaaacaccaccaggtttccaggagccacccaggctgcagctcagactgctcttatg 320

                                                                       
Query: 121 taactgtgtggtagcttgaatgatgggaagtatgacttttcaggccagctgggaccttag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactgtgtggtagcttgaatgatgggaagtatgacttttcaggccagctgggaccttag 380

                                                                       
Query: 181 ttaactgagttctaaaaggcttgttttcttgtctatagcacgaggcaagaaggccgagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaactgagttctaaaaggcttgttttcttgtctatagcacgaggcaagaaggccgagag 440

                                                                       
Query: 241 cttacagctcgatgttttcaaagccttgagtgcgtgcacatacaccatacacatgcacac 300
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 cttacagctcgatgttttcaaagccttgagtgcctgcacatacaccatacacatgcacac 500

                                                                       
Query: 301 atacagacacacacatacggggcaagcaatagtaactacattatagaatgcccggcatgc 360
           |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacagacacacacacccagggcaagcaatagtaactacattatagaatgcccggcatgc 560

                                                                       
Query: 361 tcacccatgaagcacatttaccccgtggcaacaaatgctagccttttggcaggataggaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcacccatgaagcacatttaccccgtggcaacaaatgctagccttttggcaggataggaa 620

                                                                       
Query: 421 acatttgttgaacgaattatcagccagggatttttcttttttctttttttggtttttttt 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||        ||
Sbjct: 621 acatttgttgaacgaattatcagccagggatttttctttttt-ttttttt--------tt 671

                                                                       
Query: 481 tttttttcgagacagggtttctctgtataggcctggctgtcctggaactcactctgtaaa 540
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 672 tttttttcgagacagggtttctctgtatagccctggctgtcctggaactcactctgtaga 731

                                                            
Query: 541 ccaggctggcctcgaactcaaaaatccacctgcctctgcctcccgagtg 589
           |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 732 ccaggctggcctcgaactcagaaatccacctgcctctgcctcccgagtg 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)