Query= MSMg01no277_n24.b1 MSMg01no277_n24.b1 CHROMAT_FILE:
MSMg01no277_n24.b1 PHD_FILE: MSMg01no277_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:05 2005
(318 letters)
>mm_chr12_77928571_77929288
Length = 718
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactttgtataccaggctggcctcgaattcagaaatctgcctgcctctgcctcc 63
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ggaattcactttgtagaccaggctggcctcgaattcagaaatccgcctgcctctgcctcc 263
Query: 64 cgagtgctggtattaccggcgtgtgccaccacaccccggctcctttccctttttctgctg 123
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgagtgctgggattaaaggcgtgtgccaccacaccccggctcctttccctttttctgctg 323
Query: 124 tgtccctcctgggccatgtgacacgtgctggagggactcatctggtatggcctttttctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtccctcctgggccatgtgacacgtgctggagggactcatctggtatggcctttttctt 383
Query: 184 ttgctcctccatgcctctgcactgggcagttattgaaatttacatctcggggcgggagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 384 ttgctcctccatgcctctgcactgggcagttattgaaatttacatctcggg-cgggagag 442
Query: 244 atggctcaacggttaagagcactgacagactgctcctctgaaaggtcctgagttcaattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atggctcaacggttaagagcactgacagactgctcctctgaaaggtcctgagttcaattc 502
Query: 304 ccagcaaccacatg 317
||||||||||||||
Sbjct: 503 ccagcaaccacatg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_n24.g1 MSMg01no277_n24.g1 CHROMAT_FILE:
MSMg01no277_n24.g1 PHD_FILE: MSMg01no277_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:05 2005
(339 letters)
>mm_chr12_78089087_78089825
Length = 739
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1 tcccagaacaccccctcccccactacatccctcaccc-tgctggtgaagatatgcatttg 59
||||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 682 tcccagaactccccctcccccactacatccctc-cccgtgctggtgaagatctgcatttg 624
Query: 60 gggatctccctaagcccatggaacatggcattaaatagtaaattataaacagtatggctg 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 623 gggatctccctaagcccatggaacatggcattaagtagtaaattataaacagtatggctg 564
Query: 120 accaaaagagaaaagaaagaaaggctgtggctacatctgtgacgtttccactggagattg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 accaaaagagaaaagaaagaaaggctgtggctacatctgtgacgtttccactggagattg 504
Query: 180 aatattttcctttccagccacactggactccacaccacacaccctggtcctgttcattgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatattttcctttccagccacactggactccacaccacacaccctggtcctgttcattgt 444
Query: 240 tctctctgaagtggggattttcctctcacagctgccccacggggtgtctggatcttcttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctctctgaagtggggattttcctctcacagctgccccacggggtgtctggatcttcttt 384
Query: 300 agctcccacctacccttgccatctccttcttttcctgtcc 339
||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agctcccacctacccttgccatctccttcttttcctgtcc 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
