Query= MSMg01no289_i20.b1 MSMg01no289_i20.b1 CHROMAT_FILE:
MSMg01no289_i20.b1 PHD_FILE: MSMg01no289_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:53 2005
(695 letters)
>mm_chr12_11448245_11449340
Length = 1096
Score = 1220 bits (631), Expect = 0.0
Identities = 668/681 (98%), Gaps = 4/681 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagtgataaatggttaataaaatgagtatttttaatgtgttcttgtattctaac 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 679 ggaattcagtgataaatggttaataaaatgagtgtttttaatgtgttcttgtattctaac 620
Query: 64 caaagaaaacaaattgagccaaataattttattttgtgttcttggagtatgagtaacaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 caaagaaaacaaattgagccaaataattttattttgtgttcttggagtatgagtaacaat 560
Query: 124 aattcacattctttttaaacttgaatccactcctgaatattcttgtgattacaaatgaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aattcacattctttttaaacttgaatccactcctgaatattcttgtgattacaaatgaga 500
Query: 184 agttggaccttggaaagatagaaatgaaaggaacattccacagcctcagaagagtaacga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agttggaccttggaaagatagaaatgaaaggaacattccacagcctcagaagagtaacga 440
Query: 244 gacatatgattagaatactcaggtacaccgacttcaagaacagtataagtgtaaaacctt 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 439 gacatatgattagaatactcaggtacaccaacttcaagaacagtataagtgtaaaacctt 380
Query: 304 tagaaagtgatatcatatggtctttctttgaag-tataaaaatgaaaatactgatatctt 362
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 379 tagaaagtgatatcatatggtctttctttgaagttataaaaatgaaaatactgatatctt 320
Query: 363 tttggatatcccacaccataagattgtgaagtcatgtaggagttataaaacaacagattt 422
|||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 319 tttggatatcaaatagtataagattgtgaagtcatgtaggagttgtaaaacaacagattt 260
Query: 423 tgtcttgttgacataaattattcatttattttattttatgcaactttaaaatacagtggc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtcttgttgacataaattattcatttattttattttatgcaactttaaaatacagtggc 200
Query: 483 tgcataaacaagatctgagcaatggcagtatcagtagacatgcaaacatggaggtggaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgcataaacaagatctgagcaatggcagtatcagtagacatgcaaacatggaggtggaaa 140
Query: 543 tcttgtagctttttttcccctctgtttaaaaaaaaaatactataatatttgtagtcattc 602
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 139 tcttgtagctttttttcccctctgttt--aaaaaaaatactataatatttgtagtcattc 82
Query: 603 tctgagtatcatacaatgtattttgactattttcacctccttcccaagtcatgaacacat 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tctgagtatcatacaatgtattttgactattttcacctccttcccaagtcatgaacacac 22
Query: 663 agcaactg-ggttgcctgcat 682
|||||||| ||||||||||||
Sbjct: 21 agcaactgtggttgcctgcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1096
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1086
Effective search space: 743910
Effective search space used: 743910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_i20.g1 MSMg01no289_i20.g1 CHROMAT_FILE:
MSMg01no289_i20.g1 PHD_FILE: MSMg01no289_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:53 2005
(674 letters)
>mm_chr12_11371631_11372704
Length = 1074
Score = 1226 bits (634), Expect = 0.0
Identities = 664/674 (98%)
Strand = Plus / Plus
Query: 1 ccttgggcaaggctcactgcaaagtgagagcctccagctgcttcctggtaacctgctaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgggcaaggctcactgcaaagtgagagcctccagctgcttcctggtaacctgctaag 260
Query: 61 gggaaccgtgccctggctgtaatcctcggggataaatgcttcctctggggttggtcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaaccgtgccctggctgtaatcctcggggataaatgcttcctctggggttggtcaaag 320
Query: 121 tggaatgctgagtcagggatgaattggcctgagtttgaagaaaaaggggcagagaatcaa 180
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 321 tggaatgctgagtcagggatgaattggcccgagtttgaagaataaggggcagagaatcaa 380
Query: 181 cagagagataatggcccatcatggtcatgtggagctcctcgggctgccttttctgccacc 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagagataatggtccatcatggtcatgtggagctcctcgggctgccttttctgccacc 440
Query: 241 tgcgaggcaaaggcagaggcgctttcaaagcctttggaaaaatgataactggcaaatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcgaggcaaaggcagaggcgctttcaaagcctttggaaaaatgataactggcaaatccc 500
Query: 301 acatggagcagtaattatactgtcataggcacttcctgatgctaacccccaggctgatct 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 acatggagcagtaattatactgtcataggcacttcctgatgctaagggccaggctgatct 560
Query: 361 gccaacgggattcatcttcaatatgcaattttctgaacattgctaagccaatgttttccc 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccaacaggattcatcttcaatatgcaattttctgaacattgctaagccaatgttttccc 620
Query: 421 caaccaggaagtctgacaacaggacaatgtgacttttgtcgatgccttgcctaagaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaccaggaagtctgacaacaggacaatgtgacttttgtcgatgccttgcctaagaggtg 680
Query: 481 ccagaattgtgttgacacaattgctgtgatgctgagataggctgcaagctcatctcatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccagaattgtgttgacacaattgctgtgatgctgagataggctgcaagctcatctcatgc 740
Query: 541 cctcatatgcagttgcataagggttttctatggaactttgtttcagttcaaagccagctg 600
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 741 cctcatatgcagttacataagggttttctatgaaacttcgtttcagttcaaagccagctg 800
Query: 601 gaatatggcttctccaggacaccattagaatcagataccctccaagtatgtttccagccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaatatggcttctccaggacaccattagaatcagataccctccaagtatgtttccagccc 860
Query: 661 tcacctcactcccc 674
||||||||||||||
Sbjct: 861 tcacctcactcccc 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
