Query= MSMg01no289_l15.b1 MSMg01no289_l15.b1 CHROMAT_FILE:
MSMg01no289_l15.b1 PHD_FILE: MSMg01no289_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:06 2005
(624 letters)
>mm_chr12_43507904_43508927
Length = 1024
Score = 551 bits (285), Expect = e-161
Identities = 315/325 (96%)
Strand = Plus / Minus
Query: 5 gaattctcagctctagacaaagagttaaatatggtagataagttctgagaaaagaattga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaattctcagctctagacaaagagttaaatatggtagataagttctgagaaaagaattga 266
Query: 65 tttcttccatggagatcttgcatagtttttccagtctcaagtggtcatctctacatgggg 124
|||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 265 tttcttccatggagatcttgaatagtttttccagtcccaagtgggcatctctacatgggg 206
Query: 125 ataacatatacctcagagtgtaaaaatctatgtaccatatttttggatacgattgttgta 184
||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 205 ataacatgtacctcggagtgtaataatctatgtaccatatttttggatatgattgttgta 146
Query: 185 gaatgccttattttaagaattgctggttaaattattaaattgaatttcatttagaaatca 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 145 gaatgccttattttaagaattgctggttaaattattgaattgaatttcatttagaaatca 86
Query: 245 ttttgcttgagagtagggcagaatttccagcactttctgaactacatataaacatggatg 304
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 85 ttttacttgagagtagggcagaatttccagcactttctaaactacatataaacatggatg 26
Query: 305 tgccacatttactacacatttatat 329
|||||||||||||||||||||||||
Sbjct: 25 tgccacatttactacacatttatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_l15.g1 MSMg01no289_l15.g1 CHROMAT_FILE:
MSMg01no289_l15.g1 PHD_FILE: MSMg01no289_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:06 2005
(538 letters)
>mm_chr12_43327714_43328651
Length = 938
Score = 493 bits (255), Expect = e-143
Identities = 282/295 (95%), Gaps = 8/295 (2%)
Strand = Plus / Plus
Query: 248 attactttaattttaattactttaatattatgagtttccacagattatttatattaagaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attactttaattttaattactttaatattatgagtttccacagattatttatattaagaa 507
Query: 308 tttgggagtgcttgtgaacttcattgtgaggggttcatctattgtcc----ccccctcaa 363
||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 508 tttgggagtgcttgtgaacttcattgtgaggggttcatctattgttctgaac----tcaa 563
Query: 364 aataagtcttgtggaatatccaccagtgtctgatctttcttctttctttgaatctcttga 423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 564 aataagtcttgtggaatatccacccgtgtctgatctttcttctttctttgaatctcttga 623
Query: 424 ttgctcatgtccatgaattattatagaagttaattcttggtaggagagtcaatttgttta 483
||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgttcatatccatgaattactatagaagttaattcttggtaggagagtcaatttgttta 683
Query: 484 atctgatttaacaatctgatttacacgtttcttgaatggttaatatggttaggat 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atctgatttaacaatctgatttacacgtttcttgaatggttaatatggttaggat 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
