Query= MSMg01no290_f14.b1 MSMg01no290_f14.b1 CHROMAT_FILE:
MSMg01no290_f14.b1 PHD_FILE: MSMg01no290_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:52 2005
(292 letters)
>mm_chr12_5096969_5097660
Length = 692
Score = 507 bits (262), Expect = e-148
Identities = 283/290 (97%)
Strand = Plus / Plus
Query: 1 caagctctctcatgtcctttcgtgactggaccttgggccaccatcttgtgtccctgaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 caagctctctcatgtcctttcgtgactggaccttgggccaccatcttgtgttagtgaccc 260
Query: 61 atgagcttgcatcttgtgtttacctggaatcagtatcaggtaggtgctgttgtgggtgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagcttgcatcttgtgtttacctggaatcagtatcaggtaggtgctgttgtgggtgca 320
Query: 121 gagggaagaatgatgcgacattagcattcagtgacacactgtggctgccttacctctcca 180
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gagggaagaatgatgtgacattagcattcagtgacacaccgtggctgccttacctctcca 380
Query: 181 catggtccacgttgccggccactccaagtcccccaagagtgtagatcttcccatcataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catggtccacgttgccggccactccaagtcccccaagagtgtagatcttcccatcataga 440
Query: 241 cgagactattgtgtctacaacgagggacagtcattctggagaccaggttc 290
||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 441 cgagactattgtggcgacaacgagggacagtcattctggagaccaggttc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_f14.g1 MSMg01no290_f14.g1 CHROMAT_FILE:
MSMg01no290_f14.g1 PHD_FILE: MSMg01no290_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:52 2005
(286 letters)
>mm_chr12_5260892_5261577
Length = 686
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Minus
Query: 1 agagcagggagagaaagcagtagactaaacatgagcagcagattggaccaggccttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agagcagggagagaaagcagtagactaaacatgagcagcagattggaccaggccttgaga 545
Query: 61 ggaaaggcgtgtggagcaagagaagagggagaagagaggaagacaaaagaggacaggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 544 ggaaaggcgtgtggagcaagagaagagggagaagagaggaagacaaaagagaacaggacc 485
Query: 121 aagaaatgaaggcaaagagggcaaaggtctgacatggctggtttgcataggagtgagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagaaatgaaggcaaagagggcaaaggtctgacatggctggtttgcataggagtgagaag 425
Query: 181 ctagggaagggaggcccaggaggaggaatgtagggtagaggctgagtgggacaggccgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctagggaagggaggcccaggaggaggaatgtagggtagaggctgagtgggacaggccgag 365
Query: 241 agaggaggatgacagcacagactgagtcagcgattgtcaatgctga 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agaggaggatgacagcacagactgagtcagcgattgtcaatgctga 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
