Query= MSMg01no291_b11.b1 MSMg01no291_b11.b1 CHROMAT_FILE:
MSMg01no291_b11.b1 PHD_FILE: MSMg01no291_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:47 2005
(208 letters)
>mm_chr12_32686488_32687096
Length = 609
Score = 327 bits (169), Expect = 3e-94
Identities = 196/207 (94%), Gaps = 7/207 (3%)
Strand = Plus / Minus
Query: 5 cttactcccctttttttttcttttatctttttttctttttat--tttccctcccttttct 62
||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct: 455 cttactccc--ttttttttcttttatctttttttctttttatcctt--cttcccttttct 400
Query: 63 tcactacaggacttagctgaggctttgtgttcatggtgcactgcttggtcacactgccat 122
||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 399 tcactacaggacttaactgaggctttgtattcgtggtgcactgcttggtcacactgccat 340
Query: 123 gatatccttc-ttcatgacttcccattttaaagtgaactgtaaagttgatttcggtctct 181
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gatatccttctttcatgacttcccattttaaagtgaactgtaaagttgatttcggtctct 280
Query: 182 cttccactcgatccctgagcctgtgag 208
|||||||||||||||||||||||||||
Sbjct: 279 cttccactcgatccctgagcctgtgag 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 609
Length adjustment: 9
Effective length of query: 199
Effective length of database: 600
Effective search space: 119400
Effective search space used: 119400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_b11.g1 MSMg01no291_b11.g1 CHROMAT_FILE:
MSMg01no291_b11.g1 PHD_FILE: MSMg01no291_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:48 2005
(283 letters)
>mm_chr12_32494736_32495418
Length = 683
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%)
Strand = Plus / Plus
Query: 1 tatctaacaaaagcagtaaatgagacatcataacctttcagttaggtatttcgaatgcca 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tatctaacaaaagcagtaaatgagacatcagaacctttcagttaggtatttcgaatgcca 260
Query: 61 gctcttcatttgattcttggttagacaacattttcttccattatgccaactgtgttttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcttcatttgattcttggttagacaacattttcttccattatgccaactgtgttttac 320
Query: 121 tctgttatttcctgtgtgtgtatctgtgtttgcatatgccctgacacctgtgtatgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgttatttcctgtgtgtgtatctgtgtttgcatatgccctgacacctgtgtatgtgta 380
Query: 181 tacagatctcatctgtgctgacatggagtgctgactaggacccagtaatatcttaggtat 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacagatctcatctgggctgacatggagtgctgactaggacccagtaatatcttaggtaa 440
Query: 241 ctggatagctgatgacaaaagatgcgacttgaggttggagaga 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggatagctgatgacaaaagatgcgacttgaggttggagaga 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
