Query= MSMg01no291_h19.b1 MSMg01no291_h19.b1 CHROMAT_FILE:
MSMg01no291_h19.b1 PHD_FILE: MSMg01no291_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:17 2005
(289 letters)
>mm_chr12_55869827_55870521
Length = 695
Score = 543 bits (281), Expect = e-159
Identities = 289/295 (97%), Gaps = 6/295 (2%)
Strand = Plus / Plus
Query: 1 gtttaataacactgtgattagatgcttgaaagcaaact------taaagaaaatgcacaa 54
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 gtttaataacactgtgattagatgcttgaaagcaaacttaaagataaagaaaatgcacaa 260
Query: 55 agggagagatggcaggccatattgtgatcatcacttaagatctggaagggtggctggcaa 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggagagatggcaggccatattgtgatcatcacttaagatctggaagggtggctggcaa 320
Query: 115 ccacctctgtttctggcaggcagcctgggatgctctgggatacaagatcacacatgatgg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacctctgtttctggcaggcagcctgggatgctctgggatacaagatcacacatgatgg 380
Query: 175 catgcctactatcataaaaactaaagtaaatttccacacctcccaaaatgacaaagttca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgcctactatcataaaaactaaagtaaatttccacacctcccaaaatgacaaagttca 440
Query: 235 aaagagagtgaaactattttgtcaagtatgttaaaagtaaaaaatgatcaaaatt 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagagagtgaaactattttgtcaagtatgttaaaagtaaaaaatgatcaaaatt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 695
Length adjustment: 9
Effective length of query: 280
Effective length of database: 686
Effective search space: 192080
Effective search space used: 192080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_h19.g1 MSMg01no291_h19.g1 CHROMAT_FILE:
MSMg01no291_h19.g1 PHD_FILE: MSMg01no291_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:17 2005
(122 letters)
>mm_chr12_56019718_56020239
Length = 522
Score = 188 bits (97), Expect = 1e-52
Identities = 115/121 (95%)
Strand = Plus / Minus
Query: 2 cctatctctccctactctgagctgttatcagcaggtatccaaccgctctcccccacttta 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 322 cctatctctccctactctgagctgttatcagcaggtatccaaccgctctcccccacccga 263
Query: 62 ttcccaaccccaacccccgcctctgagcatggagtgcagcttctctgcaccattcatatt 121
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 cccccaaccccaacccccgcctctgaccatggagtgcagcttctctgcaccattcatatt 203
Query: 122 c 122
|
Sbjct: 202 c 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 522
Length adjustment: 8
Effective length of query: 114
Effective length of database: 514
Effective search space: 58596
Effective search space used: 58596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
