Query= MSMg01no293_i16.b1 MSMg01no293_i16.b1 CHROMAT_FILE:
MSMg01no293_i16.b1 PHD_FILE: MSMg01no293_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:58 2005
(320 letters)
>mm_chr12_57790628_57791349
Length = 722
Score = 538 bits (278), Expect = e-157
Identities = 309/326 (94%), Gaps = 12/326 (3%)
Strand = Plus / Plus
Query: 5 gaattcagcacaatgttaaggtgaattg----------tttgcaaacgcctttcccagac 54
|||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 195 gaattcagcacaatgttaaggtgaattgaagccttcgatttgcaaacgcccttcccagac 254
Query: 55 ttgtcggcgctggagtcaatccggcgcctgtaggtggcgctgcgatgaggtgccggggtg 114
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttgtcggagctggagtcaatccggcgcctgtaggtggcgctgcgatgaggtgccggggtg 314
Query: 115 aagggaactctggctgaagtctgaaagacattaaaggggggaaaaaa--cctgaagaaaa 172
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 315 aagggaactctggctgaagtctgaaagacattaaagggggaaaaaaaaacctgaagaaaa 374
Query: 173 tttccacaactccctttctgcctctccacctcggcctgctacttttatttcgggggaata 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tttccacaactccctttctgcctctccacctcggcctgctacttttatttcgggggaata 434
Query: 233 gcggagataataccgcgggactctgagctctattaggggagagagcacaaagactgctgg 292
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 435 gcggagataataccgcgggactctgagctctattaggggagagagcacagagaccgctgg 494
Query: 293 acagagagattctacctcactgtcca 318
||||||||||||||||||||||||||
Sbjct: 495 acagagagattctacctcactgtcca 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 722
Length adjustment: 9
Effective length of query: 311
Effective length of database: 713
Effective search space: 221743
Effective search space used: 221743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_i16.g1 MSMg01no293_i16.g1 CHROMAT_FILE:
MSMg01no293_i16.g1 PHD_FILE: MSMg01no293_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:59 2005
(289 letters)
>mm_chr12_57958138_57958826
Length = 689
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Minus
Query: 1 cttagtgactgtcctggacttagagtcatgtagatatttttactggccttcctgtctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cttagtgactgtcctggacttagagtcatgtagatatttttactggccttcctgtctctt 428
Query: 61 attaccatctctccagacttgttcttagtcctgtagaagccttcttccaggagtccattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 attaccatctctccagacttgttcttagtcctgtagaagccttcttccaggagtccattc 368
Query: 121 ctagtccactttcattgccaggagactccacctcttggtgcagatcccagactccctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctagtccactttcattgccaggagactccacctcttggtgcagatcccagactccctctc 308
Query: 181 ccatggtccctctcagcctttcttcctagtccatctccaatcccttatcactctcagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccatggtccctctcagcctttcttcctagtccatctccaatcccttatcactctcagacc 248
Query: 241 ttcagaagctctgtctctctctaggaccgcaaagccaccacttttgc 287
||||||||| |||||||||||| ||||| |||||||||||| |||||
Sbjct: 247 ttcagaagcactgtctctctctgggaccacaaagccaccacatttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
