Query= MSMg01no294_m02.b1 MSMg01no294_m02.b1 CHROMAT_FILE:
MSMg01no294_m02.b1 PHD_FILE: MSMg01no294_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:30 2005
(314 letters)
>mm_chr12_77140431_77141144
Length = 714
Score = 514 bits (266), Expect = e-150
Identities = 300/312 (96%), Gaps = 2/312 (0%)
Strand = Plus / Plus
Query: 5 gaattcacgtgttgtgttcacgtggaatcatcttaaactgtcagaggacaatggagaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gaattcacgtgttgtgttcacgtggaatcatcttaaactgtcagaggacaatggagaaaa 128
Query: 65 c--agaatgtttaagcctcagtttttgcctctcagagactgtatgagctaaacaagtaga 122
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cagagaatgtttaagcctcagtttttgcctctcagagactgtatgagctaaacaagtaga 188
Query: 123 caagcttcaaggaagatggtgtcctgttgactctctccatcacatgtgatgatacggcag 182
|||||||||||||||||||||| ||||||| ||||||||||||||| ||| || |||||
Sbjct: 189 caagcttcaaggaagatggtgttttgttgacgctctccatcacatgtaatgttatggcag 248
Query: 183 catgcagccaatggcaaggaggatggtgttctgttgactatctccatcatgtgtgatgat 242
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 249 catgcagccaatggcaaggaggatggtgttctgttgactctctccatcacatgtgatgat 308
Query: 243 acagcagcatgcagccaatggcaaggaggatggtgttctgttgactatctccatcatgtg 302
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 acggcagcatgcagccaatggcaaggaggatggtgttctgttgactatctccatcatgtg 368
Query: 303 tgatgatacggc 314
||||||||||||
Sbjct: 369 tgatgatacggc 380
Score = 95.5 bits (49), Expect = 4e-24
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 130 caaggaagatggtgtcctgttgactctctccatcacatgtgatgatacggcagcatgcag 189
|||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 397 caaggaggatggtgttctgttgactatctccatcatgtgtgatgatacggcagcatgcag 456
Query: 190 ccaatggca 198
|||||||||
Sbjct: 457 ccaatggca 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_m02.g1 MSMg01no294_m02.g1 CHROMAT_FILE:
MSMg01no294_m02.g1 PHD_FILE: MSMg01no294_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:30 2005
(287 letters)
>mm_chr12_77299578_77300264
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 281/285 (98%), Gaps = 2/285 (0%)
Strand = Plus / Minus
Query: 1 ttgtaaatagaaaggatttttctaccttgaaaataccacatggcgtgaagccaggttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtaaatagaaaggatttttctaccttgaaaataccacatggcgtgaagccaggttgta 562
Query: 61 attgcagtgcttgggagactgggaggaagaaggtgggttcaaggctagcttagctgcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attgcagtgcttgggagactgggaggaagaaggtgggttcaaggctagcttagctgcaca 502
Query: 121 gcaggaccctttactaccccttagacatattgcattaaggaaattttcataaagctaaat 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaggaccctttacta--ccttagacatattgcattaaggaaattttcataaagctaaat 444
Query: 181 tgaagagtataccaattgcatcgtacacgatgagtgggcggctcagcagtcgcatactga 240
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 tgcagagtataccaattgcatcgtacaagatgagtgggcggctcagcagtcgcatactga 384
Query: 241 tctgtgtggtggttcttttcagcttgctgacttccgggaagccat 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctgtgtggtggttcttttcagcttgctgacttccgggaagccat 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
