Query= MSMg01no295_a05.b1 MSMg01no295_a05.b1 CHROMAT_FILE:
MSMg01no295_a05.b1 PHD_FILE: MSMg01no295_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:49 2005
(704 letters)
>mm_chr12_101860909_101862013
Length = 1105
Score = 534 bits (276), Expect = e-155
Identities = 296/304 (97%), Gaps = 3/304 (0%)
Strand = Plus / Minus
Query: 403 agtcagtaattcaattctccacatttagccattgcagaaagaagagcagactaactcaaa 462
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1105 agtcagtaattcaattctccacatttagccgttgcagaaagaagagcagactaactcaaa 1046
Query: 463 gcaaagagaagagaggtaaataataaataccagaagacaatttcaacagagaccatgcaa 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 gcaaagagaagagaggtaaataataaataccagaagacaatttcaacagagaccatgcaa 986
Query: 523 acaatcgggagatatcaatgaaagccaaagtggcctttgaaaagaaaaactaataataag 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 acaatcgggagatatcaatgaaagccaaagtggcctttgaaaagaaaaactaataataag 926
Query: 583 cttttaactaaaccagccattttttt---ttcttttaaggagtgaatgtaaaaccagtag 639
||||||||||||||| || ||||||| ||||||||| |||| ||||||||||||||||
Sbjct: 925 cttttaactaaaccaaccgtttttttcttttcttttaaagagtaaatgtaaaaccagtag 866
Query: 640 cggtatagagagcatgacttctgaattaaaataaatcacaaggaattctgtgaagaacta 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 cggtatagagagcatgacttctgaattaaaataaatcacaaggaattctgtgaagaacta 806
Query: 700 agta 703
||||
Sbjct: 805 agta 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1105
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1095
Effective search space: 759930
Effective search space used: 759930
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no295_a05.g1 MSMg01no295_a05.g1 CHROMAT_FILE:
MSMg01no295_a05.g1 PHD_FILE: MSMg01no295_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:49 2005
(288 letters)
>mm_chr12_101670071_101670758
Length = 688
Score = 464 bits (240), Expect = e-135
Identities = 249/252 (98%)
Strand = Plus / Plus
Query: 1 ctgccctggccacatttgatgacgaactatgatgtggaaatataaaccaaacaatcccat 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgccctggccgcatttgatgacgaactatgatgtggaaatataaaccaaacaatcccat 260
Query: 61 gtctcaccaaggtgctttttgtcatggtgcttatcagagcaacagaaatcccagctaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctcaccaaggtgctttttgtcatggtgcttatcagagcaacagaaatcccagctaaga 320
Query: 121 taatgacttactttcttagacactgagtgaggattcacaaatttaaacatataaacctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatgacttactttcttagacactgagtgaggattcacaaatttaaacatataaacctgt 380
Query: 181 tgcagctttttaatcctttctgaaatttgaattactccctatttggcccaagtccttgcc 240
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 381 tgcagctttttaatcctttctgaaatttgaattactccctatatggcccaagtccttgtc 440
Query: 241 acatgacctaga 252
||||||||||||
Sbjct: 441 acatgacctaga 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
