Query= MSMg01no295_p09.b1 MSMg01no295_p09.b1 CHROMAT_FILE:
MSMg01no295_p09.b1 PHD_FILE: MSMg01no295_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:02 2005
(321 letters)
>mm_chr12_14166260_14166980
Length = 721
Score = 520 bits (269), Expect = e-152
Identities = 295/313 (94%), Gaps = 16/313 (5%)
Strand = Plus / Plus
Query: 5 gaattctgtcttattcatctctaacaatagtctgtattatcactaataataataataata 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 221 gaattctgtcttattcatctttaacaatagtctgtattatcactaataataataat---- 276
Query: 65 ataataataatgatctaatcataatttcactgtggagaagccatctgttctctttgtagc 124
||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 -----------gat-taatcataatttcactgtggagaagccatctgttctctttgtagc 324
Query: 125 cttcataatatggacagagaaggctaggacatgaatgatgcagactaaaagaagctaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcataatatggacagagaaggctaggacatgaatgatgcagactaaaagaagctaatg 384
Query: 185 gaaagctagtatttaaaagcacagagtagagtgttatcagctatgtgagtgttcaggtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaagctagtatttaaaagcacagagtagagtgttatcagctatgtgagtgttcaggtta 444
Query: 245 aggctgttttgcaaggagactgcacagaacagagcatttctgagctggaaagggtgggaa 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 aggctgttttgcaaggagactgcacagaacagggcatttctgagctggaaagggtgggaa 504
Query: 305 aatgctatgttat 317
|||||||||||||
Sbjct: 505 aatgctatgttat 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_p09.g1 MSMg01no295_p09.g1 CHROMAT_FILE:
MSMg01no295_p09.g1 PHD_FILE: MSMg01no295_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:02 2005
(291 letters)
>mm_chr12_14330826_14331518
Length = 693
Score = 458 bits (237), Expect = e-133
Identities = 277/297 (93%), Gaps = 14/297 (4%)
Strand = Plus / Minus
Query: 1 cacccatttgtaagtaagtctttgtgtgtgtatttagctga----ttttactccagaagc 56
||||||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct: 502 cacccattt----gtaagtctttgtgtgtgtatttagctgagggc----actggagaagc 451
Query: 57 tgtaaactgtcaagaacaaggaaatactatagtcaaaggtggtggaataggcatggtgat 116
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 450 tgtaaactgtcaagaacgaggaaatactatagtcaaaggtggtggagtaggcatggtgat 391
Query: 117 cttcaccttcagcagtgtatcccatgggca--atcttacaaatgcaaaaatctgctggcc 174
||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 390 cttcaccttcatcagtgtatcccatgggcaatatcttacaaatgcaaaaatctgctggcc 331
Query: 175 catccaaatatactcaatttctagctccataagaataagtaggtaaaatgagattatttt 234
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 catccagatatactcaatttctagctccataagaataagtaggtaaaatgagattatttt 271
Query: 235 gtgaattgtcttctcccatggacacttaataattagttcctttttgttgttttgttt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtgaattgtcttctcccatggacacttaataattagttcctttttgttgttttgttt 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
