Query= MSMg01no296_d15.b1 MSMg01no296_d15.b1 CHROMAT_FILE:
MSMg01no296_d15.b1 PHD_FILE: MSMg01no296_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:22 2005
(194 letters)
>mm_chr12_10935098_10935691
Length = 594
Score = 342 bits (177), Expect = 6e-99
Identities = 189/193 (97%)
Strand = Plus / Plus
Query: 1 gaacatttcagaggtgctgagtgataggcatgcctctggcttcacaacttaaccttatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaacatttcagaggtgctgagtgataggcatgcctctggcttcacaacttaaccttatga 260
Query: 61 tttgaaggatccaggccagtcaggaaaaacaacaacaacaacaaccacactgaagttaaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 261 tttgaagaatccaggccagtcaggaaaaacaacaacaacaacaaccacattgaagtaaaa 320
Query: 121 tgatggcctgtgcactcaaccacagcttaacaggtccatactacaatggcctactagcct 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tgatggcctgtgcactcaaccacagcttagcaggtccatactacaatggcctactagcct 380
Query: 181 atctcatgttcta 193
|||||||||||||
Sbjct: 381 atctcatgttcta 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_d15.g1 MSMg01no296_d15.g1 CHROMAT_FILE:
MSMg01no296_d15.g1 PHD_FILE: MSMg01no296_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:22 2005
(285 letters)
>mm_chr12_11133562_11134246
Length = 685
Score = 485 bits (251), Expect = e-141
Identities = 279/293 (95%), Gaps = 8/293 (2%)
Strand = Plus / Minus
Query: 1 atagtgggctgaagaccttccgaggttagacactgagatcctgtctcaggaaatccagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atagtgggctgaagaccttccgaggttagacactgagatcctgtctcaggaaatccagaa 507
Query: 61 gctaaaactcaaa--------agggacatgataactgaactcagagatggaagaccacag 112
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctaaaactcaaaaccaagacagggacatgataactgaactcagagatggaagaccacag 447
Query: 113 agcagggcccaggtctgacaagaccccagaggttactaggtttcgctcagtgagcatatc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agcagggcccaggtctgacaagaccccagaggttactaggtttcgctcagtgagcatatc 387
Query: 173 tggtgcagaagattccactccatggctatctccaggctgtgcagtgtctcctcctcgatg 232
||||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||||||
Sbjct: 386 tggtgcagaagattctactccatgactatctccaggctatgtagtatctcctcctcgatg 327
Query: 233 ggcatttaggtggcttttggaataaacttatgaggaattaatgatgccctgga 285
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 326 ggcatttaggtggcttttggagtaaacttatgaggaattaatgatgccctgga 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
