Query= MSMg01no299_o16.b1 MSMg01no299_o16.b1 CHROMAT_FILE:
MSMg01no299_o16.b1 PHD_FILE: MSMg01no299_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:58 2005
(499 letters)
>mm_chr12_120335778_120336676
Length = 899
Score = 951 bits (492), Expect = 0.0
Identities = 495/496 (99%)
Strand = Plus / Minus
Query: 4 gaattcaactatcccttctgctttggggactggaggctgggcaaaggcaagtctaattag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gaattcaactatcccttctgctttggggactggaggctgggcaaaggcaagtctaattag 480
Query: 64 aatccagacaaatcccaaatcccagaaattttcttgacaaagagaaaacacccagtgaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aatccagacaaatcccaaatcccagaaattttcttgacaaagagaaaacacccagtgaca 420
Query: 124 gtactttttatttcaatagcctttcccaaagatggtggaaaatatctgctagtgactaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtactttttatttcaatagcctttcccaaagatggtggaaaatatctgctagtgactaga 360
Query: 184 aggctctatgggagactgccatctagtagatgtaggcatggcagcagctcacatggaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aggctctatgggagactgccatctagtagatgtaggcatggcagcagctcacatggaaat 300
Query: 244 gggcttctggaattccaataatgcactatatgcaaagtattcctggagttctgagcaagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gggcttctggaattccaataatgcactatatgcaaagtattcctggagttctgagcaagg 240
Query: 304 actctaactaatcatggtccttgctataaggtctaaggtagtactatgtccagttttctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 actctaactaatcatggtccttgctataaggtctaaggtagtactatgtccagttttctg 180
Query: 364 aggaaccgccagactgatttccagagtggttgtacaagcttgcaattccaccaacaatgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aggaaccgccagactgatttccagagtggttgtacaagcttgcaattccaccaacaatgg 120
Query: 424 aggagtgttcctctttctccacatcctctccagcatctgctgtcacctgaattttttatt 483
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 119 aggagtgttcctctttctccacatcctctccagcatctgttgtcacctgaattttttatt 60
Query: 484 ttagccattctgactg 499
||||||||||||||||
Sbjct: 59 ttagccattctgactg 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_o16.g1 MSMg01no299_o16.g1 CHROMAT_FILE:
MSMg01no299_o16.g1 PHD_FILE: MSMg01no299_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:58 2005
(291 letters)
>mm_chr12_120175535_120176224
Length = 690
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 tctgtattttaaaagcaacttttagatgtggggagttttactgatacaatgacttagcaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtattttaaaggcaacttttagatgtggggagttttactgatacaatgacttagcaa 260
Query: 61 agaacatcagaaacattatttgtctcatggacattgaaaattagtgagcctgacttgaat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacattagaaacattatttgtctcatggacattgaaaattagtgagcctgacttgaat 320
Query: 121 tgatttgttattatgcacaaaaggaaggattcaggggggttaggtcacaggactatagca 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatttgttattatgcacaaa-ggaaggattcaggggggttaggtcacaggactatagca 379
Query: 181 ggaagaggaacctctcttatgagtagagaacggtcctgaagccattgctattcatatatg 240
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 ggaagaggaacttctcttatgagtagagaatggtcctgaagccattgctattcatatatg 439
Query: 241 ttggaatatggtcagtaaatattttatctttcaacactaggaggtgagact 291
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 ttggaatatggtcagtaaatgttttatctttcaacactaggaggtgagact 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
