Query= MSMg01no299_o22.b1 MSMg01no299_o22.b1 CHROMAT_FILE:
MSMg01no299_o22.b1 PHD_FILE: MSMg01no299_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:59 2005
(526 letters)
>mm_chr12_6906605_6907530
Length = 926
Score = 267 bits (138), Expect = 1e-75
Identities = 144/146 (98%)
Strand = Plus / Minus
Query: 5 gaattcagaaagcctcattggtttgtcatccacatcataacagtcaggtaagcaagatca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaattcagaaagccacattggtttgtcatccacatcataacagtcaggtaagcaagatca 287
Query: 65 ggaatcctcagtatcataattacaaaacaacagtgtcactatcaacacatcaacaccaaa 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 286 ggaatcctcagtatcataattacaaaacaacagtgtcactatcaacacatcaacgccaaa 227
Query: 125 tactatttattagaaacacacacaca 150
||||||||||||||||||||||||||
Sbjct: 226 tactatttattagaaacacacacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_o22.g1 MSMg01no299_o22.g1 CHROMAT_FILE:
MSMg01no299_o22.g1 PHD_FILE: MSMg01no299_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:59 2005
(524 letters)
>mm_chr12_6723835_6724757
Length = 923
Score = 503 bits (260), Expect = e-146
Identities = 407/524 (77%), Gaps = 106/524 (20%)
Strand = Plus / Plus
Query: 1 taaagaaatgtgctattttcaatgtttgtgtgcttttatgtacatgtgtattgtaaagag 60
||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 taaagaaatgtgctactttaaatgtttgtgtgcttttatgtacatgtgtattataaagag 260
Query: 61 ccttcattgtttagagtatttaggaaactgattagagaatattcatgataattgaaaaaa 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 261 ccttcattgtttagagtatttaggaaactgattagagaagattcatgataattg-aaaaa 319
Query: 121 aattgtaaataacataataattcattcatcagttttgttgggttcattgttcaggtcaaa 180
||||||||||||
Sbjct: 320 aattgtaaataa------------------------------------------------ 331
Query: 181 aagtcagatcttgtagtccccaaatgaaatacatgcatcttgttagaagacctagggaag 240
|| ||||
Sbjct: 332 ---------------------------------------------------ct---gaag 337
Query: 241 aaattattctgaaaaattatagaacatggctgtgatgcatagatctttaataatcaaaga 300
|||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 338 aaattattctgaaaaaatatagaacatggctgtgatgcatagatctttaagaagcaaaga 397
Query: 301 gtaaaattgaggagctggctctgtgcacactgggctcccataccaacgtaaaggcccaag 360
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 398 gtaaaattgaggagctggctctgtgcacactgggctcccatacaaatgtaaaggcccaag 457
Query: 361 gcagaatgagtaaaatacagggggagtagcattgtctctgtaacctccttctttctacaa 420
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 458 gcagaatgagtaaaatacaggaggagtagcattgtctctgtaacct---tctttctacaa 514
Query: 421 tagcatgggatgctgtgagagagtccttggaggacaagagccaggtactctgctgtatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tagcatgggatgctgtgagagagtccttggaggacaagagccaggtactctgctgtatga 574
Query: 481 ggttccaaagaactgaaataccctacttgaaataagacctgtct 524
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 575 ggttccaaagcactgaaataccctacttgaaataagacctgtct 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 923
Length adjustment: 10
Effective length of query: 514
Effective length of database: 913
Effective search space: 469282
Effective search space used: 469282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
