Query= MSMg01no300_o09.b1 MSMg01no300_o09.b1 CHROMAT_FILE:
MSMg01no300_o09.b1 PHD_FILE: MSMg01no300_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:09 2005
(694 letters)
>mm_chr12_14993088_14994181
Length = 1094
Score = 1295 bits (670), Expect = 0.0
Identities = 685/690 (99%)
Strand = Plus / Plus
Query: 5 gaattcccttcaccacagattgcttcagatccaatcggaggcttattgcctccatccaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccttcaccaaagattgcttcagatccaatcggaggcttattgcctccatccaaa 264
Query: 65 gtagccatgacatattcacacaagtgggcccactcttactggaaagtccagtgttggata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtagccatgacatattcacacaagtgggcccactcttactggaaagtccagtgttggata 324
Query: 125 agataagatcattactatcttttcctacccagaagtctgcatgacacctttcagaaccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agataagatcattactatcttttcctacccagaagtctgcatgacacctttcagaaccat 384
Query: 185 aaaagctggcaatcagggagtttcttaaaggtcaatttgagattgatttcataatggtca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaagctggcaatcagggagtttcttaaaggtcaatttgagattgatttcataatggtca 444
Query: 245 tgcctcttaaatatttatggttatactcatagatttatgacatttttattctgggccaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcctcttaaatatttatggttatactcatagatttatgacatttttattctgggccaga 504
Query: 305 gaagcccctcccctcagacacacatggagtggatagtggtcaatgcagagacacgtaact 364
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 gaagcccctcccctcagacacacatggagtggctagtggtcaatgcagagacacgtaact 564
Query: 365 ggtcaatagactgagaatcaaaaactgagtacttaatcaaagacacaacagctatatcca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtcaatagactgagaatcaaaaactgagtacttaatcaaagacacaacagctatatcca 624
Query: 425 aggttcagagaacatcttgaaggaggaggcatgaagaatgtaaggctgaaatggctgaga 484
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 625 aggttcagagaacatcttgaaggaggaggcatgaagaatttaaggctgaaatggctgaga 684
Query: 485 tgggtgttgtgaagttccagcttaaagatatgttatgtctgtttcagatatagaccaaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgggtgttgtgaagttccagcttaaagatatgttatgtctgtttcagatatagaccaaca 744
Query: 545 actgctgtgatggactccaaaagatctgcacaagataaagcttggtaggattttaacata 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 actgctgtgatggactccaaaagatctgcacaagataaagcttggtaggattttaacata 804
Query: 605 gatgaggaagcacctgaggtcccatgccagagaaactattagcaactgatagctgctggg 664
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gatgaggaagcaccagaggtcccatgccagagaaactattagcaactgatagctgctggg 864
Query: 665 gggagaagaatcagttttctttatggatgt 694
|| |||||||||||||||||||||||||||
Sbjct: 865 ggtagaagaatcagttttctttatggatgt 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_o09.g1 MSMg01no300_o09.g1 CHROMAT_FILE:
MSMg01no300_o09.g1 PHD_FILE: MSMg01no300_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:09 2005
(666 letters)
>mm_chr12_15073355_15074419
Length = 1065
Score = 1249 bits (646), Expect = 0.0
Identities = 661/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Minus
Query: 1 atgtgtagaatcgggagctattaaatacctcatataaaccttcagccgcagaaacatgct 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 865 atgtgtagaatcgggagctattaaatacctcatataaaccttcag-tgcagaaacatgct 807
Query: 61 gaatgtttaatatttaccagatgatttaatgcatggattcatttaattgtttctgaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gaatgtttaatatttaccagatgatttaatgcatggattcatttaattgtttctgaaatg 747
Query: 121 ctataagcgaactgtagatagccttgttgtacaaatgaagatggagaatttcaaggcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctataagcgaactgtagatagccttgttgtacaaatgaagatggagaatttcaaggcacc 687
Query: 181 aagtagtatggccaaggttattcgtgataagttgtaactgggcacccaagcccactcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aagtagtatggccaaggttattcgtgataagttgtaactgggcacccaagcccactcatt 627
Query: 241 gcattgccatctgatactggatcattccttttaacttatcctaagtgcttttggattgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gcattgccatctgatactggatcattccttttaacttatcctaagtgcttttggattgga 567
Query: 301 aagttctctctacacaagtgacttgcatacctacttctaaaaaagaataaggaagaatgt 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 566 aagttctctctacacaagtgacttgcatacatacttctaaaaaagaataaggaagaatgt 507
Query: 361 aatagaaatctcattcatttatgaatcaggttgggtgttttctaacacctagtaggaaat 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aatagaaatctcattcattcatgaatcaggttgggtgttttctaacacctagtaggaaat 447
Query: 421 attggtatgtgaaattgtcttaaaatctctgcccagactggtattcaaagttaaaatttc 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 actggtatgtgaaattgtcttaaaatctctgcccagactggtattcaaagttaaaatttc 387
Query: 481 tctttcaagattcctctgatggtggactacagctttatacaaatatagttgatactatag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctttcaagattcctctgatggtggactacagctttatacaaatatagttgatactatag 327
Query: 541 caaccatgtctttccccaaagtctaaagtttgaagcagcagaattgaacattcccacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caaccatgtctttccccaaagtctaaagtttgaagcagcagaattgaacattcccacagt 267
Query: 601 aacaaatgcaatgattatcgatgatgggaacaaggttagaaacaagtttttaccatgtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aacaaatgcaatgattatcgatgatgggaacaaggttagaaacaagtttttaccatgtaa 207
Query: 661 acctgc 666
||||||
Sbjct: 206 acctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1065
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1055
Effective search space: 692080
Effective search space used: 692080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
