Query= MSMg01no301_e09.b1 MSMg01no301_e09.b1 CHROMAT_FILE:
MSMg01no301_e09.b1 PHD_FILE: MSMg01no301_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:38 2005
(357 letters)
>mm_chr12_95024551_95025308
Length = 758
Score = 565 bits (292), Expect = e-165
Identities = 336/356 (94%), Gaps = 12/356 (3%)
Strand = Plus / Minus
Query: 1 gaccaattcatttaattcactgatttccttgtgaaagactctgagattataaccgttttt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 454 gaccaattcatttaattcactgatttccttgtgaaagactctgagacaataattgttttt 395
Query: 61 attattt-aaaaaaatgtagtgttttctatgagattcactctaaatagctgcattgtaaa 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 attatttaaaaaaaatgtagtgttttctatgagattcactctaaatagctgcattgtaaa 335
Query: 120 atgaatagaattttcaacatctgctattacaaaatattgtaccaattaatgtgttagggt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atgaatagaattttcaacatctgctattacaaaatattgtaccaattaatgtgttagggt 275
Query: 180 gattttgattattggcagctctaattagatgacataattcaattcattttaggtttgtgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 274 gattttgattattggcagctctaattagatgacataattcaattcattttaggtttgggg 215
Query: 240 gttttgtttggttgttttctgtttttcttttcttttcttttcttttcttttcttttcttt 299
|||||||||||||| || ||||| || || ||||||||||||||||||||||
Sbjct: 214 gttttgtttggttgatt---gtttt-ctgtt-------tttcttttcttttcttttcttt 166
Query: 300 tcttttcttttcttattcctccatactctccttgatgatgtttgtaactttcattt 355
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 165 tcttttcttttcttattcctccatactctccttgatgatgtttgtaagtttcattt 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_e09.g1 MSMg01no301_e09.g1 CHROMAT_FILE:
MSMg01no301_e09.g1 PHD_FILE: MSMg01no301_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:38 2005
(651 letters)
>mm_chr12_94837132_94838184
Length = 1053
Score = 1220 bits (631), Expect = 0.0
Identities = 647/653 (99%), Gaps = 2/653 (0%)
Strand = Plus / Plus
Query: 1 attaacataacttgtacttgatgaatttgaatcttcagaatcatcctactgaccctgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaacataacttgtacttgatgaatttgaatcttcagaatcatcctactgaccctgaat 260
Query: 61 ataggagatggaaaaaaacaacaaaacaaacggaagagcattagagaattatccaatctg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ataggagatggaaaaaaacaacaaaacaaactgaagagcattagagaattatccaatctg 320
Query: 121 tgcatgtattgtggagagaaacagcttgctcctttgaaaagatgaacttcaagagctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcatgtattgtggagagaaacagcttgctcctttgaaaagatgaacttcaagagctgtg 380
Query: 181 gaatctcacaggcggttgtagtgttcattaactttaaagtagaacactgctgttctgcac 240
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatctcacaggcagttctagtgttcattaactttaaagtagaacactgctgttctgcac 440
Query: 241 atcctagcaatcgatcaaatcatgtttcctaattcattaataagccatgatatatat--t 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 atcctagcaatcgatcaaatcatgtttcctaattcattaataagccatgatatatatatt 500
Query: 299 ttttttgcaaagagatgaaacccaaagtgtcctgtagtacatctaatattatcccatgaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttttgcaaagagatgaaacccaaagtgtcctgtagtacatctaatattatcccatgaa 560
Query: 359 agaatctactttttgtaattttgtactaaaggatgcacagagaaaaatgggcctctacct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaatctactttttgtaattttgtactaaaggatgcacagagaaaaatgggcctctacct 620
Query: 419 caccatgtgcttccttttaattctaagcacatgggcacaggaggagaaagaaacaaatgt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caccatgtgcttccttttaattctaagcacatgggcacaggaggagaaagaaacaaatgt 680
Query: 479 ctgattccaaatgctttaagattaatgcatggttctgataaatgacataaatgggcaata 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgattccaaatgctttaagattaatgcatggttctgataaatgacataaatgggcaata 740
Query: 539 tgactggcggcgatatcattgctgattgttctgagaccaacttaatttattttaaaataa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgactggcggcgatatcattgctgattgttctgagaccaacttaatttattttaaaataa 800
Query: 599 attgtctttaaaagtgaagcttaattttattaaactactttgccagtctttta 651
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 801 attgtctttaaaagtgaagcttaattttataaaactactttgccagtctttta 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1053
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1043
Effective search space: 668563
Effective search space used: 668563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
