Query= MSMg01no302_m19.b1 MSMg01no302_m19.b1 CHROMAT_FILE:
MSMg01no302_m19.b1 PHD_FILE: MSMg01no302_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:31 2005
(166 letters)
>mm_chr12_111919396_111919961
Length = 566
Score = 321 bits (166), Expect = 1e-92
Identities = 166/166 (100%)
Strand = Plus / Minus
Query: 1 ccggaggaagccactctatgtgagctctgatccctctttgggctaagcccacctttctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ccggaggaagccactctatgtgagctctgatccctctttgggctaagcccacctttctcc 307
Query: 61 caggagattgcgccccgagattcactcccactttctgggactgcagccaggtttccagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caggagattgcgccccgagattcactcccactttctgggactgcagccaggtttccagct 247
Query: 121 tgtctttctggacacagccccaggggttgtgacagggtttgggggt 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgtctttctggacacagccccaggggttgtgacagggtttgggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no302_m19.g1 MSMg01no302_m19.g1 CHROMAT_FILE:
MSMg01no302_m19.g1 PHD_FILE: MSMg01no302_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:31 2005
(286 letters)
>mm_chr12_111735536_111736220
Length = 685
Score = 520 bits (269), Expect = e-152
Identities = 280/287 (97%), Gaps = 7/287 (2%)
Strand = Plus / Plus
Query: 1 agagcagagagtttgccagcttgcctgaggtcctggagcagttggtgacagaggccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagcagagagtttgccagcttgcctgaggtcctggagcagttggtgacagaggccttgg 260
Query: 61 gctttctgactcacagttctgggctcacatgctccagacaggcatgggaagctgctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttctgactcacagttctgggctcacatgctccagacaggcatgggaagctgctcttg 320
Query: 121 caggttcctttatctcggggatctcggcagaggtgtctgctgcgtttacagtggtgtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggttcctttatctcggggatctcggcagaggtgtctgctgcgtttacagtggtgtaga 380
Query: 181 gtgcgggctcccgaaacaggctggtcaatctgatggtgtcatctagaaaaaacacaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgcgggctcccgaaacaggctggtcaatctgatggtgtcatctagaaaaaacacaagat 440
Query: 241 gcagatcctggttttgg---gaaggtaaggctcttcccaaaggcttg 284
||||||||||| || |||||||||||||||||||||||||||
Sbjct: 441 gcagatcctgg----ggcgggaaggtaaggctcttcccaaaggcttg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
