Query= MSMg01no302_p09.b1 MSMg01no302_p09.b1 CHROMAT_FILE:
MSMg01no302_p09.b1 PHD_FILE: MSMg01no302_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:44 2005
(317 letters)
>mm_chr12_73441834_73442551
Length = 718
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctcttatgagaatt-ataaaacccttgagagagttctgtgagaggagcaaaa 63
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctcttatgagaatttataaaacccttgagagagttctgtgagaggagcaaaa 264
Query: 64 ggaagggaacggggagacttgcctggagctgttttgtagctgtgagagctgccatgtcag 123
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 ggaagggatcggggagacttgcctggagctgtgttgtagctgtgagagctgccatgtcag 324
Query: 124 aatttagtaagaatggcaataagatgagcaacagcgaaagctcacctctgaagtactgag 183
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 agtttagtaagaatggcaataagatgagcaacagcgaaagctcacctctgaagtaccgag 384
Query: 184 aagagccctggtaatgactatgaaaatgagcattagaaatgcacgtaggggatcactggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagagccctggtaatgactatgaaaatgagcattagaaatgcacgtaggggatcactggc 444
Query: 244 tgcgcacgtctcactgaaaaggcagggacagtatcctcaggtggccctctgctgacaaga 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 tgcgcacgtctcactgaaaaggcagggacagtaacctcaggtggccctctgctgacaaga 504
Query: 304 gaattctgcccc 315
||||||||||||
Sbjct: 505 gaattctgcccc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_p09.g1 MSMg01no302_p09.g1 CHROMAT_FILE:
MSMg01no302_p09.g1 PHD_FILE: MSMg01no302_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:44 2005
(662 letters)
>mm_chr12_73610940_73612001
Length = 1062
Score = 1228 bits (635), Expect = 0.0
Identities = 655/662 (98%)
Strand = Plus / Minus
Query: 1 accactgaactagtcttgggagctgttcatgatgtcatgcagaaagcgtgaaaaaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 accactgaactagtcttgggagctgttcatgatgtcatgcagaaagcgtgaaaaaatctt 803
Query: 61 tgaaagaagtcaggaaatgcgtttttacactgagagtaggttagtcacaacccataagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgaaagaagtcaggaaatgcgtttttacactgagagtaggttagtcacaacccataagtg 743
Query: 121 attcaataaattaaaaagaaatacagttttgaaatcagcacggccacagacaacctgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 attcaataaattaaaaagaaatacagttttgaaatcagcacggccacagacaacctgaca 683
Query: 181 aaatgtacaatgctaagacgcaaactaaaccatgcactttgaagtaaggttagacgtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaatgtacaatgctaagacgcaaactaaaccatgcactttgaagtaaggttagacgtcaa 623
Query: 241 atgagatggctcttttaaatgagggtttttccctttgttttttattgctgctgcttgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atgagatggctcttttaaatgagggtttttccctttgttttttattgctgctgcttgttc 563
Query: 301 gttttttcattctctctgaaactctttgtaaaaataccttcaacttcaggagttaaggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gttttttcattctctctgaaactctttgtaaaaataccttcaacttcaggagttaaggtg 503
Query: 361 aagtcaggtcccaggaaacggctaaatccagcaggcagaagaacatttgttattttaatg 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagtcaggtcccaagaaacggctaaatccagcaggcagaagaacatttgttattttaatg 443
Query: 421 ggaggggctttaacgtggcagaatgacccaccatccgtagagttggtaacaggaacgaac 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggagaggctttaacgtggcagaatgacccaccatccgtagagttggtaacaggaacgaac 383
Query: 481 tacacaataaaataaaacagttaagaacatcttacctctganacgaaaataaatagattt 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 tacacaataaaataaaacagttaagaacatcttacctctgaaacgaaaataaatagattt 323
Query: 541 agtccttatcacaagccccacagcacaataaaccttaagacgcatttttacatgcttgcc 600
||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||
Sbjct: 322 agtccttatcacaagccccacggcacgacaaaccttaagacgcatttttacatgcttgcc 263
Query: 601 taagctcgggattggtgcttctgaaatatggacagaacagagtcctgcaggcccagggtt 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taagctcgggattggtacttctgaaatatggacagaacagagtcctgcaggcccagggtt 203
Query: 661 ga 662
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
