Query= MSMg01no303_n14.b1 MSMg01no303_n14.b1 CHROMAT_FILE:
MSMg01no303_n14.b1 PHD_FILE: MSMg01no303_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:52 2005
(699 letters)
>mm_chr12_46006650_46007749
Length = 1100
Score = 971 bits (502), Expect = 0.0
Identities = 532/542 (98%), Gaps = 1/542 (0%)
Strand = Plus / Minus
Query: 157 tggacatgggtttaaggtcaactgctgatgtgtgagcatcttatcaagggccacatcttt 216
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1100 tggacatgggtttaaggtcaactgctgatgtgtgagcatcttatcaggggccacatcttt 1041
Query: 217 gatgaaagccgactctttctccccaaccctctcccaacccagagccaatcaaatgcttct 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 gatgaaagccgactctttctccccaaccctctcccaacccagagccaatcaaatgcttct 981
Query: 277 gttaggggtagagctcagccccatcatctatgctgaacatcgattggcttgatctgagtg 336
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 980 gttaggggtagagctcagctccatcatctatgctgaacattgattggctcgatctgaatg 921
Query: 337 ctgtttcttatccaggaaattagtttgcatttgaagagttgcttttaactaacttcctgg 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ctgtttcttatccaggaaattagtttgcatttgaagagttgcttttaactaacttcctgg 861
Query: 397 tagactactgtcttcactggacacatgcaatttgagggctttaattttaaaaatcagccc 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tagactactgtcttcactggacacatgcaatttgagggctttaattttaaaaatcagccc 801
Query: 457 gaaactcccaaaacaagaaagaaattagcttccattttcttcaggttttgtatt-tggag 515
||||||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||
Sbjct: 800 gaaactcccaaaacaaggaagaaattggcttccattttcttcatgttttgtattctggag 741
Query: 516 tggtacagtgttgaagtattttgatttttgtgaaaggaaaatctcatttaattctataat 575
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tggtacagcgttgaagtattttgatttttgtgaaaggaaaatctcatttaattctataat 681
Query: 576 aatgtgtatataataacatgattttaaggcacctgattcagactcaaaactaggatgttg 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatgtgtatataataacatgattttaaggcacctgattcagactcaaaactaggatgttg 621
Query: 636 gagataataacaataaacaaaaatcaaagcaaactgggcttggtgcccaggaaagctagc 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gagataataacaataaacaaaaatcaaagcaaactgggcttggtgcccaggaaagctagc 561
Query: 696 ca 697
||
Sbjct: 560 ca 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1100
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1090
Effective search space: 751010
Effective search space used: 751010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_n14.g1 MSMg01no303_n14.g1 CHROMAT_FILE:
MSMg01no303_n14.g1 PHD_FILE: MSMg01no303_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:52 2005
(364 letters)
>mm_chr12_45810150_45810908
Length = 759
Score = 592 bits (306), Expect = e-173
Identities = 340/354 (96%), Gaps = 7/354 (1%)
Strand = Plus / Plus
Query: 1 agccaaggagaagaaacaatgagtaagtagctgttgtttattttgaatgattagaaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccaaggagaagaaacaatgagtaagtagctgttgtttattttgaatgattagaaggta 260
Query: 61 cactggtagagaaataattttgaacaaactttctgtggcattttcaagtattttagaagt 120
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 cattggtagagaaataattttgaacaagctttctgtggcattttcaagtattttagaagt 320
Query: 121 tgacagaaaggacatctttaggacggtttcttttttaattatgttctactgaaatatgag 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacagaaaggacatctttaggacagtttcttttttaattatgttctactgaaatatgag 380
Query: 181 ttcttttcttttcttctaagtaaagttctttttaaagaagaaatatttttgaaggcaaat 240
|||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 381 ttcttttctt-----ctaagtaaagtactttttacagaagaaatatttttgaaggcaaat 435
Query: 241 tggccatcattaaaagagatagatagatggatggat-gaatagatatatagatagcagaa 299
|||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct: 436 tggccatcattaaaagagatagatggatggatggataga-tagatatataggtagcagaa 494
Query: 300 taagacaggatagggttaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taagacaggatagggttaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 759
Length adjustment: 9
Effective length of query: 355
Effective length of database: 750
Effective search space: 266250
Effective search space used: 266250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
